MPD: Data set: HMDPpheno7

Ghazalpour A, Bennett BJ, Shih D, Che N, Orozco L, Pan C, Hagopian R, He A, Kayne P, Yang WP, Kirchgessner T, Lusis AJ. Genetic regulation of mouse liver metabolite levels. Mol Syst Biol. 2014 May 23;10(5):730. doi: 10.15252/msb.20135004. PubMed 24860088

Investigators	Anatole Ghazalpour University of California, Los Angeles, Los Angeles, CA Brian J Bennett University of North Carolina, Chapel Hill, NC Luz Orozco University of California, Los Angeles, Los Angeles, CA Aldons J Lusis University of California, Los Angeles, Los Angeles, CA
Participants	Shih D, Che N, Pan C, Hagopian R, He A, Kayne P, Yang W-P
Contact	Anatole Ghazalpour aghazalp@ucla.edu Lab web site
Affiliated Center	Hybrid Mouse Diversity Panel Group (HMDP)
Part of a series:	• Metabolite survey: Amino acids see HMDPpheno6 • Metabolite survey: Carbs, cofactors, vitamins, energy, xenobiotics (this project) HMDPpheno7 • Metabolite survey: Lipids (non-lysolipids) see HMDPpheno8 • Metabolite survey: Lipids (lysolipids) see HMDPpheno9 • Metabolite survey: Nucleotides, peptides see HMDPpheno10
Project type	Phenotype strain survey data set
MPD identifiers	HMDPpheno7 MPD:502
Data changelog	No updates/corrections. Initial release date: 06/2014.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
HMDPpheno7:1	HMDPpheno7	metabolite quantification	(none)	liver erythronate (16h fast), relative abundance erythronate 50201	HMDP	102	m	16wks	N=1

HMDPpheno7:2	HMDPpheno7	metabolite quantification	(none)	liver glucosamine (16h fast), relative abundance glucosamine 50202	HMDP	93	m	16wks	N=1

HMDPpheno7:3	HMDPpheno7	metabolite quantification	(none)	liver erythrose (16h fast), relative abundance erythrose 50203	HMDP	106	m	16wks	N=1

HMDPpheno7:4	HMDPpheno7	metabolite quantification	(none)	liver fructose (16h fast), relative abundance fructose 50204	HMDP	106	m	16wks	N=1

HMDPpheno7:5	HMDPpheno7	metabolite quantification	(none)	liver maltose (16h fast), relative abundance maltose 50205	HMDP	94	m	16wks	N=1

HMDPpheno7:6	HMDPpheno7	metabolite quantification	(none)	liver mannose (16h fast), relative abundance mannose 50206	HMDP	106	m	16wks	N=1

HMDPpheno7:7	HMDPpheno7	metabolite quantification	(none)	liver sorbitol (16h fast), relative abundance sorbitol 50207	HMDP	106	m	16wks	N=1

HMDPpheno7:8	HMDPpheno7	metabolite quantification	(none)	liver maltotetraose (16h fast), relative abundance maltotetraose 50208	HMDP	100	m	16wks	N=1

HMDPpheno7:9	HMDPpheno7	metabolite quantification	(none)	liver 1,5-anhydroglucitol (1,5-AG) (16h fast), relative abundance anhydroglucitol 50209	HMDP	105	m	16wks	N=1

HMDPpheno7:10	HMDPpheno7	metabolite quantification	(none)	liver glucose (16h fast), relative abundance glucose 50210	HMDP	106	m	16wks	N=1

HMDPpheno7:11	HMDPpheno7	metabolite quantification	(none)	liver glucuronate (16h fast), relative abundance glucuronate 50211	HMDP	104	m	16wks	N=1

HMDPpheno7:12	HMDPpheno7	metabolite quantification	(none)	liver glycerate (16h fast), relative abundance glycerate 50212	HMDP	106	m	16wks	N=1

HMDPpheno7:13	HMDPpheno7	metabolite quantification	(none)	liver lactate (16h fast), relative abundance lactate 50213	HMDP	106	m	16wks	N=1

HMDPpheno7:14	HMDPpheno7	metabolite quantification	(none)	liver 3-phosphoglycerate (16h fast), relative abundance phosphoglycerate 50214	HMDP	105	m	16wks	N=1

HMDPpheno7:15	HMDPpheno7	metabolite quantification	(none)	liver gluconate (16h fast), relative abundance gluconate 50215	HMDP	106	m	16wks	N=1

HMDPpheno7:16	HMDPpheno7	metabolite quantification	(none)	liver 2-ketogulonate (16h fast), relative abundance ketogulonate 50216	HMDP	97	m	16wks	N=1

HMDPpheno7:17	HMDPpheno7	metabolite quantification	(none)	liver ribitol (16h fast), relative abundance ribitol 50217	HMDP	106	m	16wks	N=1

HMDPpheno7:18	HMDPpheno7	metabolite quantification	(none)	liver ribose (16h fast), relative abundance ribose 50218	HMDP	106	m	16wks	N=1

HMDPpheno7:19	HMDPpheno7	metabolite quantification	(none)	liver ribulose (16h fast), relative abundance ribulose 50219	HMDP	106	m	16wks	N=1

HMDPpheno7:20	HMDPpheno7	metabolite quantification	(none)	liver xylitol (16h fast), relative abundance xylitol 50220	HMDP	106	m	16wks	N=1

HMDPpheno7:21	HMDPpheno7	metabolite quantification	(none)	liver xylonate (16h fast), relative abundance xylonate 50221	HMDP	106	m	16wks	N=1

HMDPpheno7:22	HMDPpheno7	metabolite quantification	(none)	liver 6-phosphogluconate (16h fast), relative abundance phosphogluconate 50222	HMDP	106	m	16wks	N=1

HMDPpheno7:23	HMDPpheno7	metabolite quantification	(none)	liver UDP-glucose (16h fast), relative abundance UDP_glucose 50223	HMDP	105	m	16wks	N=1

HMDPpheno7:24	HMDPpheno7	metabolite quantification	(none)	liver arabonate (16h fast), relative abundance arabonate 50224	HMDP	85	m	16wks	N=1

HMDPpheno7:25	HMDPpheno7	metabolite quantification	(none)	liver ascorbate (Vitamin C) (16h fast), relative abundance ascorbate 50225	HMDP	94	m	16wks	N=1

HMDPpheno7:26	HMDPpheno7	metabolite quantification	(none)	liver glucarate (saccharate) (16h fast), relative abundance glucarate 50226	HMDP	106	m	16wks	N=1

HMDPpheno7:27	HMDPpheno7	metabolite quantification	(none)	liver gulono-1,4-lactone (16h fast), relative abundance lactone 50227	HMDP	106	m	16wks	N=1

HMDPpheno7:28	HMDPpheno7	metabolite quantification	(none)	liver threonate (16h fast), relative abundance threonate 50228	HMDP	106	m	16wks	N=1

HMDPpheno7:29	HMDPpheno7	metabolite quantification	(none)	liver biopterin (16h fast), relative abundance biopterin 50229	HMDP	106	m	16wks	N=1

HMDPpheno7:30	HMDPpheno7	metabolite quantification	(none)	liver 5-methyltetrahydrofolate (5MeTHF) (16h fast), relative abundance MeTHF 50230	HMDP	93	m	16wks	N=1

HMDPpheno7:31	HMDPpheno7	metabolite quantification	(none)	liver nicotinamide adenine dinucleotide (NAD+) (16h fast), relative abundance NAD 50231	HMDP	106	m	16wks	N=1

HMDPpheno7:32	HMDPpheno7	metabolite quantification	(none)	liver nicotinamide (16h fast), relative abundance nicotinamide 50232	HMDP	106	m	16wks	N=1

HMDPpheno7:33	HMDPpheno7	metabolite quantification	(none)	liver trigonelline (N'-methylnicotinate) (16h fast), relative abundance trigonelline 50233	HMDP	106	m	16wks	N=1

HMDPpheno7:34	HMDPpheno7	metabolite quantification	(none)	pantothenate (16h fast), relative abundance pantothenate 50234	HMDP	106	m	16wks	N=1

HMDPpheno7:35	HMDPpheno7	metabolite quantification	(none)	riboflavin (Vitamin B2) (16h fast), relative abundance riboflavin 50235	HMDP	106	m	16wks	N=1

HMDPpheno7:36	HMDPpheno7	metabolite quantification	(none)	flavin adenine dinucleotide (FAD) (16h fast), relative abundance FAD 50236	HMDP	106	m	16wks	N=1

HMDPpheno7:37	HMDPpheno7	metabolite quantification	(none)	flavin mononucleotide (FMN) (16h fast), relative abundance FMN 50237	HMDP	105	m	16wks	N=1

HMDPpheno7:38	HMDPpheno7	metabolite quantification	(none)	thiamin (Vitamin B1) (16h fast), relative abundance thiamin 50238	HMDP	106	m	16wks	N=1

HMDPpheno7:39	HMDPpheno7	metabolite quantification	(none)	pyridoxate (16h fast), relative abundance pyridoxate 50239	HMDP	106	m	16wks	N=1

HMDPpheno7:40	HMDPpheno7	metabolite quantification	(none)	citrate (16h fast), relative abundance citrate 50240	HMDP	104	m	16wks	N=1

HMDPpheno7:41	HMDPpheno7	metabolite quantification	(none)	fumarate (16h fast), relative abundance fumarate 50241	HMDP	106	m	16wks	N=1

HMDPpheno7:42	HMDPpheno7	metabolite quantification	(none)	malate (16h fast), relative abundance malate 50242	HMDP	106	m	16wks	N=1

HMDPpheno7:43	HMDPpheno7	metabolite quantification	(none)	succinylcarnitine (16h fast), relative abundance succinylcarnitine 50243	HMDP	93	m	16wks	N=1

HMDPpheno7:44	HMDPpheno7	metabolite quantification	(none)	cis-aconitate (16h fast), relative abundance aconitate 50244	HMDP	101	m	16wks	N=1

HMDPpheno7:45	HMDPpheno7	metabolite quantification	(none)	acetylphosphate (16h fast), relative abundance acetylphosphate 50245	HMDP	106	m	16wks	N=1

HMDPpheno7:46	HMDPpheno7	metabolite quantification	(none)	phosphate (16h fast), relative abundance phosphate 50246	HMDP	106	m	16wks	N=1

HMDPpheno7:47	HMDPpheno7	metabolite quantification	(none)	glycerol 2-phosphate (16h fast), relative abundance glycerol_phosphate 50247	HMDP	106	m	16wks	N=1

HMDPpheno7:48	HMDPpheno7	metabolite quantification	(none)	methyl-alpha-glucopyranoside (16h fast), relative abundance glucopyranoside 50248	HMDP	105	m	16wks	N=1

HMDPpheno7:49	HMDPpheno7	metabolite quantification	(none)	N-glycolylneuraminate (16h fast), relative abundance glycolylneuraminate 50249	HMDP	100	m	16wks	N=1

HMDPpheno7:50	HMDPpheno7	metabolite quantification	(none)	ergothioneine (16h fast), relative abundance ergothioneine 50250	HMDP	106	m	16wks	N=1

HMDPpheno7:51	HMDPpheno7	metabolite quantification	(none)	erythritol (16h fast), relative abundance erythritol 50251	HMDP	106	m	16wks	N=1

HMDPpheno7: Liver metabolite levels: Carbohydrates, cofactors and vitamins, energy, and xenobiotics in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP) (2014)