MPD: Data set: HMDPpheno9

Ghazalpour A, Bennett BJ, Shih D, Che N, Orozco L, Pan C, Hagopian R, He A, Kayne P, Yang WP, Kirchgessner T, Lusis AJ. Genetic regulation of mouse liver metabolite levels. Mol Syst Biol. 2014 May 23;10(5):730. doi: 10.15252/msb.20135004. PubMed 24860088

Investigators	Anatole Ghazalpour University of California, Los Angeles, Los Angeles, CA Brian J Bennett University of North Carolina, Chapel Hill, NC Luz Orozco University of California, Los Angeles, Los Angeles, CA Aldons J Lusis University of California, Los Angeles, Los Angeles, CA
Participants	Shih D, Che N, Pan C, Hagopian R, He A, Kayne P, Yang W-P
Contact	Anatole Ghazalpour aghazalp@ucla.edu Lab web site
Affiliated Center	Hybrid Mouse Diversity Panel Group (HMDP)
Part of a series:	• Metabolite survey: Amino acids see HMDPpheno6 • Metabolite survey: Carbs, cofactors, vitamins, energy, xenobiotics see HMDPpheno7 • Metabolite survey: Lipids (non-lysolipids) see HMDPpheno8 • Metabolite survey: Lipids (lysolipids) (this project) HMDPpheno9 • Metabolite survey: Nucleotides, peptides see HMDPpheno10
Project type	Phenotype strain survey data set
MPD identifiers	HMDPpheno9 MPD:504
Data changelog	No updates/corrections. Initial release date: 06/2014.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
HMDPpheno9:1	HMDPpheno9	metabolite quantification	(none)	liver 2-arachidonoylglycerophosphocholine (16h fast), relative abundance AGPC 50401	HMDP	106	m	16wks	N=1

HMDPpheno9:2	HMDPpheno9	metabolite quantification	(none)	liver 2-docosahexaenoylglycerophosphocholine (16h fast), relative abundance DHGPC 50402	HMDP	105	m	16wks	N=1

HMDPpheno9:3	HMDPpheno9	metabolite quantification	(none)	liver 2-docosahexaenoylglycerophosphoethanolamine (16h fast), relative abundance DHGPEA 50403	HMDP	106	m	16wks	N=1

HMDPpheno9:4	HMDPpheno9	metabolite quantification	(none)	liver 2-docosapentaenoylglycerophosphocholine (16h fast), relative abundance DPGPC 50404	HMDP	94	m	16wks	N=1

HMDPpheno9:5	HMDPpheno9	metabolite quantification	(none)	liver 2-docosapentaenoylglycerophosphoethanolamine (16h fast), relative abundance DPGPEA 50405	HMDP	100	m	16wks	N=1

HMDPpheno9:6	HMDPpheno9	metabolite quantification	(none)	liver 1-eicosatrienoylglycerophosphocholine (16h fast), relative abundance EGPC_1 50406	HMDP	91	m	16wks	N=1

HMDPpheno9:7	HMDPpheno9	metabolite quantification	(none)	liver 2-eicosatrienoylglycerophosphocholine (16h fast), relative abundance EGPC_2 50407	HMDP	102	m	16wks	N=1

HMDPpheno9:8	HMDPpheno9	metabolite quantification	(none)	liver 1-heptadecanoylglycerophosphocholine (16h fast), relative abundance HGPC 50408	HMDP	99	m	16wks	N=1

HMDPpheno9:9	HMDPpheno9	metabolite quantification	(none)	liver 1-linoleoylglycerophosphocholine (16h fast), relative abundance LGPC_1 50409	HMDP	106	m	16wks	N=1

HMDPpheno9:10	HMDPpheno9	metabolite quantification	(none)	liver 2-linoleoylglycerophosphocholine (16h fast), relative abundance LGPC_2 50410	HMDP	106	m	16wks	N=1

HMDPpheno9:11	HMDPpheno9	metabolite quantification	(none)	liver 2-linoleoylglycerophosphoethanolamine (16h fast), relative abundance LGPEA_2 50411	HMDP	106	m	16wks	N=1

HMDPpheno9:12	HMDPpheno9	metabolite quantification	(none)	liver 1-myristoylglycerophosphocholine (16h fast), relative abundance MGPC 50412	HMDP	91	m	16wks	N=1

HMDPpheno9:13	HMDPpheno9	metabolite quantification	(none)	liver 1-oleoylglycerophosphocholine (16h fast), relative abundance OGPC_1 50413	HMDP	106	m	16wks	N=1

HMDPpheno9:14	HMDPpheno9	metabolite quantification	(none)	liver 2-oleoylglycerophosphocholine (16h fast), relative abundance OGPC_2 50414	HMDP	106	m	16wks	N=1

HMDPpheno9:15	HMDPpheno9	metabolite quantification	(none)	liver 1-pentadecanoylglycerophosphocholine (16h fast), relative abundance PDGPC 50415	HMDP	93	m	16wks	N=1

HMDPpheno9:16	HMDPpheno9	metabolite quantification	(none)	liver 1-palmitoylglycerophosphocholine (16h fast), relative abundance PGPC_1 50416	HMDP	106	m	16wks	N=1

HMDPpheno9:17	HMDPpheno9	metabolite quantification	(none)	liver 2-palmitoylglycerophosphocholine (16h fast), relative abundance PGPC_2 50417	HMDP	106	m	16wks	N=1

HMDPpheno9:18	HMDPpheno9	metabolite quantification	(none)	liver 1-palmitoleoylglycerophosphocholine (16h fast), relative abundance POGPC 50418	HMDP	105	m	16wks	N=1

HMDPpheno9:19	HMDPpheno9	metabolite quantification	(none)	liver 1-stearoylglycerophosphocholine (16h fast), relative abundance SGPC_1 50419	HMDP	106	m	16wks	N=1

HMDPpheno9:20	HMDPpheno9	metabolite quantification	(none)	liver 2-stearoylglycerophosphocholine (16h fast), relative abundance SGPC_2 50420	HMDP	91	m	16wks	N=1

HMDPpheno9:21	HMDPpheno9	metabolite quantification	(none)	liver 1-stearoylglycerophosphoethanolamine (16h fast), relative abundance SGPE 50421	HMDP	106	m	16wks	N=1

HMDPpheno9:22	HMDPpheno9	metabolite quantification	(none)	liver 2-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance AGPA 50422	HMDP	106	m	16wks	N=1

HMDPpheno9:23	HMDPpheno9	metabolite quantification	(none)	liver 1-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance AGPEA 50423	HMDP	106	m	16wks	N=1

HMDPpheno9:24	HMDPpheno9	metabolite quantification	(none)	liver 1-arachidonoylglycerophosphoinositol (16h fast), relative abundance AGPI 50424	HMDP	104	m	16wks	N=1

HMDPpheno9:25	HMDPpheno9	metabolite quantification	(none)	liver 1-linoleoylglycerophosphoethanolamine (16h fast), relative abundance LGPEA_1 50425	HMDP	106	m	16wks	N=1

HMDPpheno9:26	HMDPpheno9	metabolite quantification	(none)	liver 1-oleoylglycerophosphoethanolamine (16h fast), relative abundance OGPEA_1 50426	HMDP	106	m	16wks	N=1

HMDPpheno9:27	HMDPpheno9	metabolite quantification	(none)	liver 2-oleoylglycerophosphoethanolamine (16h fast), relative abundance OGPEA_2 50427	HMDP	103	m	16wks	N=1

HMDPpheno9:28	HMDPpheno9	metabolite quantification	(none)	liver 1-oleoylglycerophosphoinositol (16h fast), relative abundance OGPI 50428	HMDP	100	m	16wks	N=1

HMDPpheno9:29	HMDPpheno9	metabolite quantification	(none)	liver 2-palmitoylglycerophosphoethanolamine (16h fast), relative abundance PGEA 50429	HMDP	93	m	16wks	N=1

HMDPpheno9:30	HMDPpheno9	metabolite quantification	(none)	liver 1-palmitoylglycerophosphoethanolamine (16h fast), relative abundance PGPEA 50430	HMDP	106	m	16wks	N=1

HMDPpheno9:31	HMDPpheno9	metabolite quantification	(none)	liver 1-palmitoylglycerophosphoinositol (16h fast), relative abundance PGPI 50431	HMDP	106	m	16wks	N=1

HMDPpheno9:32	HMDPpheno9	metabolite quantification	(none)	liver 1-stearoylglycerophosphoinositol (16h fast), relative abundance SGPI 50432	HMDP	106	m	16wks	N=1

HMDPpheno9: Liver metabolite levels: Lipids (lysolipids) in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP) (2014)