MPD: Phenotype measures mapped to VT:0002209, germ cell quantity

Phenotype measures directly associated with ontology term
VT:0002209 'germ cell quantity'

This list only includes measures mapped to VT:0002209 directly. Measures mapped to its ontology descendants are not included. Alternatively, you can show measures mapped to VT:0002209 AND its descendants.

VT:0002673 sperm quantity
VT:0005431 oocyte quantity

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Dzur-Gejdosova1:3	Dzur-Gejdosova1	microscopy	(none)	sperm cells counted in Bürker chamber [millions] SC 27203	QTL population		m	9wks	N=254	2012

Handel1:49	Handel1	sperm count	(none)	sperm count (n x 10⁶ per mouse) [n] sperm_count 12049	inbred	14	m	8-10wks	N=5	2010

Lazear1:2	Lazear1	sperm count	(none)	number of sperm per mL of semen (x 10⁶) [n/mL] sperm_count 63102	CC	10	m	15-22wks	N=2	2018

Odet1:31	Odet1	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_per_mouse 53731	inbred w/CC8	8	m	10-66wks	N=21	2015

Odet1:32	Odet1	sperm count	(none)	sperm count per mg testis weight (x 10³) [n] sperm_per_testis 53732	inbred w/CC8	8	m	10-66wks	N=20	2015

Odet1:33	Odet1	sperm count	(none)	sperm count per seminiferous epithelium length (x 10³) [n] sperm_per_seminif 53733	inbred w/CC8	8	m	10-66wks	N=19	2015

Parker1:1	Parker1	assisted reproduction	(none)	mean number of oocytes per female following treatment [n] oocyte_num 62901 2.5 IU eCG 5 IU eCG 5 + 5 IU eCG	inbred	6	f	3-6wks	N=18	2011

Parker1:4	Parker1	assisted reproduction	(none)	mean number of fertilized oocytes per female following treatment [n] oocyte_fert_num 62904 2.5 IU eCG 5 IU eCG 5 + 5 IU eCG	inbred	6	f	3-6wks	N=18	2011

Parker1:7	Parker1	assisted reproduction	(none)	percentage of oocytes that are fertilized per female following treatment [%] oocyte_fert_pct 62907 2.5 IU eCG 5 IU eCG 5 + 5 IU eCG	inbred	6	f	3-6wks	N=18	2011

Payseur2:3	Payseur2	sperm count	(none)	sperm count per mL (x10⁶) [n] SpermDensity 64003	QTL population		m	10-11wks	N=312	2018

Shorter4:12	Shorter4	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_count 110104	CC	12	m	15-33wks	N=3	2019

Shorter4:13	Shorter4	sperm count	(none)	sperm count per mg testis weight (x 10³) [n/mg] sperm_adj 110105	CC	12	m	15-33wks	N=3	2019

Shorter5:12	Shorter5	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_count 110129	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:13	Shorter5	sperm count	(none)	sperm count per mg testis weight (x 10³) [n/mg] sperm_adj 110130	CC RIX	28	m	7-44wks	N=4	2019

Shorter8:13	Shorter8	sperm count	(none)	sperm count per mouse (x10⁶) [n] sperm_count 110168	DO population		m	12-15wks	N=150	2019

Shorter8:14	Shorter8	sperm count	(none)	sperm count per mg testis weight (x10³) [n] sperm_adj 110169	DO population		m	12-15wks	N=149	2019

Taft1:1	Taft1	assisted reproduction	(none)	percentage of females responding to superovulation [%] super_pct 19301	inbred	10	f		N=17	2006

Taft1:3	Taft1	assisted reproduction	(none)	total oocytes per donor [n] oocyte_donor 19303	inbred	10	f		N=17	2006

Taft1:5	Taft1	assisted reproduction	(none)	percent of live oocytes per donor [%] pct_live_super 19305	inbred	10	f		N=17	2006

Taft1:6	Taft1	assisted reproduction	(none)	percent of dead oocytes per donor [%] pct_dead_super 19306	inbred	10	f		N=17	2006

Taft1:7	Taft1	assisted reproduction	(none)	percent of fragmented oocytes per donor [%] pct_frag_super 19307	inbred	10	f		N=17	2006

Taft1:14	Taft1	assisted reproduction	(none)	fragmented oocytes, percentage of IVF dish cells [%] pct_frag_IVF 19314	inbred	10	f		N=17	2006

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