MPD: Phenotype measures mapped to MP:0005371, limbs/digits/tail phenotype

Phenotype measures associated with ontology term
MP:0005371 'limbs/digits/tail phenotype'

All measures in this list are mapped to the ontology descendants of MP:0005371. None are mapped to MP:0005371 directly.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Ankra-Badu1:13	Ankra-Badu1	body size and weight	(none)	length of tail at week 10 [cm] TAIL 21213	QTL population		both	10wks	N=502	2009

Auwerx1:233	Auwerx1	organ weights	high-fat diet	soleus muscle weight [g] soleus_wt 111412 CD HFD	BXD w/par	57	m	29wks	N=4	2016

Auwerx2:125	Auwerx2	organ weights	(none)	gastrocnemius muscle weight [g] gastroc_wt 114653 CD HFD	inbred w/CC8	9	both	21wks	N=4	2021

Beamer1:1	Beamer1	computed tomography	(none)	femur, average bone volume (total, mid diaphysis) [g/cm³] femur_mid_cort_vol 10501	QTL population		f	20wks	N=711	1999

Beamer1:2	Beamer1	computed tomography	(none)	femur, average cortical bone volume (mid-diaphysis) [g/cm³] femur_mid_tot_vol 10502	QTL population		f	20wks	N=711	1999

Beamer2:6	Beamer2	computed tomography	(none)	femur, average bone volume (total, mid-diaphysis) [g/cm³] femur_mid_tot_vol 11206	QTL population		f	16wks	N=999	2001

Beamer2:7	Beamer2	computed tomography	(none)	femur, average cortical bone volume, mid-diaphysis [g/cm³] femur_mid_cort_vol 11207	QTL population		f	16wks	N=999	2001

Beamer2:8	Beamer2	computed tomography	(none)	femur, percentage of total volume that is cortical bone [%] femur_pct_cort 11208	QTL population		f	16wks	N=999	2001

Beamer2:9	Beamer2	computed tomography	(none)	femur, surface area to tissue volume (index) [ratio] femur_ratio 11209	QTL population		f	16wks	N=999	2001

Beamer2:10	Beamer2	computed tomography	(none)	femur, length, condyles to rostral tip of greater trochanter [mm] femur_length 11210	QTL population		f	16wks	N=999	2001

Beamer2:11	Beamer2	computed tomography	(none)	femur, average cortical thickness, mid-diaphysis [mm] femur_thickness 11211	QTL population		f	16wks	N=999	2001

Beamer2:12	Beamer2	computed tomography	(none)	femur, medial to lateral width, mid-diaphysis [mm] femur_ML 11212	QTL population		f	16wks	N=999	2001

Beamer2:13	Beamer2	computed tomography	(none)	femur, anterior to posterior width, rostral to caudal, mid-diaphysis [mm] femur_AP 11213	QTL population		f	16wks	N=999	2001

Beamer2:14	Beamer2	computed tomography	(none)	femur, ratio of medial-lateral (ML) to anterior-posterior (AP) [ratio] femur_ML_AP 11214	QTL population		f	16wks	N=999	2001

Brockmann1:8	Brockmann1	muscle weights	(none)	muscle weight [mg] Mw 21308	QTL population		both	6wks	N=138	2009

Brockmann1:25	Brockmann1	muscle weights	(none)	muscle weight [mg] mw 21505	QTL population		both	6wks	N=201	2009

Burke1:1	Burke1	computed tomography	(none)	right femur length [mm] Femur_length 26301	QTL population		f	80wks	N=505	2012

Burke1:21	Burke1	computed tomography	(none)	right femur length [mm] Femur_length_b 26801	QTL population		f	80wks	N=832	2012

Chesler2:61	Chesler2	body size and weight	(none)	tail length [cm] tail_length 43488	CC diallel w/par	47	both	7-15wks	N=3	2011

Chesler3:88	Chesler3	body size and weight	(none)	tail length [cm] tail_length 43588	CC pre w/par	352	both	7-15wks	N=2	2011

Chesler3:90	Chesler3	bone dimensions	(none)	periosteal (outer) circumference, femoral mid-diaphysis [mm] bone_circumference 43590	CC pre w/par	235	both	7-15wks	N=1	2011

Churchill1:9	Churchill1	muscle weights	(none)	weight of isolated quadriceps muscle [g] quadricep_wt 17109	F1 8way	63	both	7-8wks	N=5	2004

Donahue2:13	Donahue2	bone dimensions	(none)	length of right femur, condyles to rostral tip of greater trochanter [mm] femur_length 17213	inbred	10	both	16wks	N=10	2004

Donahue2:14	Donahue2	bone dimensions	(none)	anterior to posterior, rostral to caudal, width of right femur, mid-diaphysis [mm] femur_width_AP 17214	inbred	10	both	16wks	N=10	2004

Donahue2:15	Donahue2	bone dimensions	(none)	medial to lateral width of right femur, mid-diaphysis [mm] femur_width_ML 17215	inbred	10	both	16wks	N=10	2004

Donahue2:16	Donahue2	computed tomography	(none)	cross sectional bone area, whole thigh area minus muscle area, femoral mid-diaphysis [mm²] femur_area 17216	inbred	10	both	16wks	N=10	2004

Donahue2:17	Donahue2	computed tomography	(none)	cortical thickness of right femur, pQCT [mm] femur_thickness_R1 17217	inbred	10	both	16wks	N=10	2004

Donahue2:18	Donahue2	computed tomography	(none)	cortical thickness of right femur, µCT [mm] femur_thickness_R2 17218	inbred	10	both	16wks	N=10	2004

Donahue2:19	Donahue2	computed tomography	(none)	cortical thickness of left femur, pQCT [mm] femur_thickness_L 17219	inbred	10	both	16wks	N=10	2004

Donahue2:20	Donahue2	computed tomography	(none)	periosteal (outer) circumference, femoral mid-diaphysis [mm] femur_out 17220	inbred	10	both	16wks	N=10	2004

Donahue2:21	Donahue2	computed tomography	(none)	endosteal (inner) circumference, femoral mid-diaphysis [mm] femur_in 17221	inbred	10	both	16wks	N=10	2004

Donahue2:22	Donahue2	DXA	(none)	cross-sectional area of thigh muscle and bone, femoral mid-diaphysis [mm²] thigh_area 17222	inbred	10	both	16wks	N=10	2004

Donahue2:24	Donahue2	muscle weights	(none)	weight of isolated right quadriceps muscle [g] quadricep_wt 17224	inbred	10	both	16wks	N=10	2004

GMC21:2	GMC21	bone dimensions	(none)	tibia length [mm] tibia_length 57002	inbred w/CC8	8	both	21wks	N=11	2018

JaxKOMP-EAP:46	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail presence tail_presence 100340 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:47	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail length tail_length 100341 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:48	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail thickness tail_thickness 100342 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:49	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail morphology tail_morphology 100343 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:50	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail curvature tail_curvature 100344 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:51	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail shape tail_shape 100345 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:65	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimbs position forelimbs_position 100359 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:66	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimbs size forelimbs_size 100360 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:67	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimb footpads forelimb_footpads 100361 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:68	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimbs position hindlimbs_position 100362 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:69	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimbs shape hindlimbs_shape 100363 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:70	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimbs footpads hindlimbs_footpad 100364 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:79	JaxKOMP-EAP	observation (SHIRPA)	(none)	forepaw size forepaw_size 100373 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:80	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindpaw size hindpaw_size 100374 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:81	JaxKOMP-EAP	observation (SHIRPA)	(none)	forepaw shape forepaw_shape 100375 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:82	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindpaw shape hindpaw_shape 100376 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:83	JaxKOMP-EAP	observation (SHIRPA)	(none)	forepaw position forepaw_position 100377 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:84	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindpaw position hindpaw_position 100378 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:87	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimb digit size forelimb_digit_size 100381 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:88	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimb digit size hindlimb_digit_size 100382 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:89	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimb digit shape forelimb_digit_shape 100383 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:90	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimb digit shape hindlimb_digit_shape 100384 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:91	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimb digit position forelimb_digit_position 100385 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:123	JaxKOMP-EAP	observation (SHIRPA)	(none)	forelimbs shape forelimbs_shape 100417 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:124	JaxKOMP-EAP	observation (SHIRPA)	(none)	hindlimbs size hindlimbs_size 100418 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:131	JaxKOMP-EAP	observation (SHIRPA)	(none)	tail elevation tail_elevation 100425 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:311	JaxKOMP-EAP	X-ray	(none)	brachydactyly brachydactyly 100639 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:314	JaxKOMP-EAP	X-ray	(none)	digit integrity digit_integrity 100644 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:327	JaxKOMP-EAP	X-ray	(none)	number of digits digits_num number_of_digits 100659	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:334	JaxKOMP-EAP	X-ray	(none)	polysyndactylism polysyndactylism 100666 categorical	KOMP	18	both	14wks		2017

JaxKOMP-EAP:336	JaxKOMP-EAP	X-ray	(none)	radius radius 100668 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:343	JaxKOMP-EAP	X-ray	(none)	syndactylism syndactylism 100677 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:345	JaxKOMP-EAP	X-ray	(none)	tibia tibia 100680 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:347	JaxKOMP-EAP	X-ray	(none)	ulna ulna 100683 categorical	KOMP	76	both	14wks		2017

JaxKOMP-LAP:35	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail presence tail_presence 101340 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:36	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail length tail_length 101341 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:37	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail thickness tail_thickness 101342 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:38	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail morphology tail_morphology 101343 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:39	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail curvature tail_curvature 101344 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:40	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail shape tail_shape 101345 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:54	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs position forelimbs_position 101359 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:55	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs size forelimbs_size 101360 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:56	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb footpads forelimb_footpads 101361 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:57	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs position hindlimbs_position 101362 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:58	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs shape hindlimbs_shape 101363 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:59	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs footpads hindlimbs_footpad 101364 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:68	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw size forepaw_size 101373 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:69	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw size hindpaw_size 101374 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:70	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw shape forepaw_shape 101375 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:71	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw shape hindpaw_shape 101376 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:72	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw position forepaw_position 101377 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:73	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw position hindpaw_position 101378 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:76	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit size forelimb_digit_size 101381 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:77	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimb digit size hindlimb_digit_size 101382 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:78	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit shape forelimb_digit_shape 101383 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:79	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimb digit shape hindlimb_digit_shape 101384 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:80	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit position forelimb_digit_position 101385 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:112	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs shape forelimbs_shape 101417 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:113	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs size hindlimbs_size 101418 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:120	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail elevation tail_elevation 101425 categorical	KOMP	148	both	66-72wks		2021

Lake2:44	Lake2	observation (SHIRPA)	(none)	distance between ankle joints during tail suspension (score 0-2) [score] hindlimb_susp 21744	B6.A consomic w/par	23	both	8wks	N=8	2005

Levy1:3	Levy1	computed tomography	(none)	femur length [mm] femur_length 54903	CC pre	31	both	8-14wks	N=3	2015

Lionikas1:10	Lionikas1	bone dimensions	exercise	length of femur [mm] femur 48510 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:11	Lionikas1	muscle weights	exercise	weight of tibialis anterior muscle [g] tibialis 48511 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:12	Lionikas1	muscle weights	exercise	weight of extensor digitorum longus muscle [g] extensor 48512 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:13	Lionikas1	muscle weights	exercise	weight of gastrocnemius muscle [g] gastrocnemius 48513 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:14	Lionikas1	muscle weights	exercise	weight of quadriceps femoris muscle [g] quadriceps 48514 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:15	Lionikas1	muscle weights	exercise	weight of soleus muscle [g] soleus 48515 control exercise	inbred	6	m	11-14wks	N=15	2012

Lionikas1:16	Lionikas1	microscopy	exercise	cross-sectional area of type I fibers of soleus muscle [µm²] soleus_area1 48516 control exercise	inbred	6	m	11-14wks	N=6	2012

Lionikas1:17	Lionikas1	microscopy	exercise	cross-sectional area of type IIa fibers of soleus muscle [µm²] soleus_area2A 48517 control exercise	inbred	6	m	11-14wks	N=6	2012

Lionikas1:18	Lionikas1	microscopy	exercise	total number of fibers of soleus muscle [n] soleus_fibers 48518 control exercise	inbred	6	m	11-14wks	N=6	2012

Lionikas1:19	Lionikas1	microscopy	exercise	number of type I fibers of soleus muscle [n] soleus_fibers1 48519 control exercise	inbred	6	m	11-14wks	N=6	2012

Lionikas1:20	Lionikas1	microscopy	exercise	number of type IIa fibers of soleus muscle [n] soleus_fibers2A 48520 control exercise	inbred	6	m	11-14wks	N=6	2012

Lionikas1:21	Lionikas1	microscopy	exercise	number of intermediate fibers of soleus muscle [n] soleus_intermediate 48521 control exercise	inbred	6	m	11-14wks	N=6	2012

Project1140:308	Project1140	body size and weight	(none)	tail length [cm] Tail_Length 116800	DO population		f	varies	N=300	2022

RIKEN-EAD1:28	RIKEN-EAD1	body size and weight	(none)	tail length (base of tail to tip of tail) [mm] tail_length 37228	inbred RBRC	43	both	12wks	N=9	2008

RIKEN-EAD2:28	RIKEN-EAD2	body size and weight	(none)	tail length, base of tail to tip of tail [mm] tail_length 37828	wild-derived RBRC	27	both	12wks	N=10	2008

Schoonjans1:230	Schoonjans1	organ weights	high-fat diet	gastrocnemius muscle weight [g] gastroc_wt 112865 CD HFD	BXD w/par	35	m	29wks	N=5	2021

Schoonjans1:232	Schoonjans1	organ weights	high-fat diet	soleus muscle weight [g] soleus_wt 112867 CD HFD	BXD w/par	35	m	29wks	N=5	2021

Shorter2:41	Shorter2	bone dimensions	various diets	femur length [mm] femur_length 62141 control diet high-fat cholic acid diet low-fat high-protein diet	DO population		both	12-25wks	N=140	2018

Wergedal1:3	Wergedal1	DXA	(none)	cortical thickness [mm] CrtThk 18903	QTL population		f	10wks	N=661	2006

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