Project measure / variable:   HMDPpheno9   DHGPEA

ID, description, units MPD:50403   DHGPEA   liver 2-docosahexaenoylglycerophosphoethanolamine (16h fast), relative abundance    
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 2-docosahexaenoylglycerophosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1748669   None
Median of the strain means1423788   None
SD of the strain means± 1188825
Coefficient of variation (CV)0.680
Min–max range of strain means270516   –   6387746   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 20 37840160262213.2 1892008013110.66 2.6805 0.0067
Residuals 31 21881313047801.4 705848807993.594


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 4602115.0 0.0   1   0.0 0.0 4602115.0, 4602115.0 2.4
A/J m 800584.0 596643.0   2   421890.0 0.745 378693.0, 1222474.0 -0.8
AKR/J m 891410.0 0.0   1   0.0 0.0 891410.0, 891410.0 -0.72
AXB10/PgnJ m 1280626.0 0.0   1   0.0 0.0 1280626.0, 1280626.0 -0.39
AXB12/PgnJ m 642491.0 0.0   1   0.0 0.0 642491.0, 642491.0 -0.93
AXB13/PgnJ m 694210.0 0.0   1   0.0 0.0 694210.0, 694210.0 -0.89
AXB15/PgnJ m 474740.0 0.0   1   0.0 0.0 474740.0, 474740.0 -1.07
AXB19a/PgnJ m 1433702.0 0.0   1   0.0 0.0 1433702.0, 1433702.0 -0.26
AXB19b/PgnJ m 4534802.0 1401477.0   2   990994.0 0.309 3543808.0, 5525796.0 2.34
AXB19/PgnJ m 3526106.0 0.0   1   0.0 0.0 3526106.0, 3526106.0 1.5
AXB1/PgnJ m 6387746.0 0.0   1   0.0 0.0 6387746.0, 6387746.0 3.9
AXB23/PgnJ m 1371760.0 0.0   1   0.0 0.0 1371760.0, 1371760.0 -0.32
AXB24/PgnJ m 896742.0 775561.0   2   548404.0 0.865 348338.0, 1445147.0 -0.72
AXB2/PgnJ m 1167792.0 0.0   1   0.0 0.0 1167792.0, 1167792.0 -0.49
AXB4/PgnJ m 2051590.0 0.0   1   0.0 0.0 2051590.0, 2051590.0 0.25
AXB5/PgnJ m 1048092.0 0.0   1   0.0 0.0 1048092.0, 1048092.0 -0.59
AXB6/PgnJ m 1047339.0 0.0   1   0.0 0.0 1047339.0, 1047339.0 -0.59
AXB8/PgnJ m 597186.0 0.0   1   0.0 0.0 597186.0, 597186.0 -0.97
BALB/cJ m 1217848.0 346455.0   3 200026.0 0.284 852864.0, 1542190.0 -0.45
BTBR T+ Itpr3tf/J m 2202176.0 0.0   1   0.0 0.0 2202176.0, 2202176.0 0.38
BUB/BnJ m 1593156.0 0.0   1   0.0 0.0 1593156.0, 1593156.0 -0.13
BXA11/PgnJ m 1085601.0 0.0   1   0.0 0.0 1085601.0, 1085601.0 -0.56
BXA12/PgnJ m 762369.0 0.0   1   0.0 0.0 762369.0, 762369.0 -0.83
BXA13/PgnJ m 2196485.0 0.0   1   0.0 0.0 2196485.0, 2196485.0 0.38
BXA14/PgnJ m 3670894.0 0.0   1   0.0 0.0 3670894.0, 3670894.0 1.62
BXA16/PgnJ m 918937.0 342260.0   2   242014.0 0.372 676923.0, 1160951.0 -0.7
BXA1/PgnJ m 1036549.0 0.0   1   0.0 0.0 1036549.0, 1036549.0 -0.6
BXA24/PgnJ m 1731612.0 0.0   1   0.0 0.0 1731612.0, 1731612.0 -0.01
BXA25/PgnJ m 805092.0 0.0   1   0.0 0.0 805092.0, 805092.0 -0.79
BXA26/PgnJ m 2054508.0 0.0   1   0.0 0.0 2054508.0, 2054508.0 0.26
BXA2/PgnJ m 1409162.0 0.0   1   0.0 0.0 1409162.0, 1409162.0 -0.29
BXA4/PgnJ m 901818.0 0.0   1   0.0 0.0 901818.0, 901818.0 -0.71
BXA7/PgnJ m 922037.0 0.0   1   0.0 0.0 922037.0, 922037.0 -0.7
BXA8/PgnJ m 1459463.0 0.0   1   0.0 0.0 1459463.0, 1459463.0 -0.24
BXD11/TyJ m 727060.0 0.0   1   0.0 0.0 727060.0, 727060.0 -0.86
BXD12/TyJ m 5031126.0 0.0   1   0.0 0.0 5031126.0, 5031126.0 2.76
BXD13/TyJ m 1102644.0 0.0   1   0.0 0.0 1102644.0, 1102644.0 -0.54
BXD14/TyJ m 4116247.0 0.0   1   0.0 0.0 4116247.0, 4116247.0 1.99
BXD15/TyJ m 1675898.0 0.0   1   0.0 0.0 1675898.0, 1675898.0 -0.06
BXD18/TyJ m 677542.0 0.0   1   0.0 0.0 677542.0, 677542.0 -0.9
BXD19/TyJ m 1433226.0 113647.0   2   80361.0 0.0793 1352865.0, 1513586.0 -0.27
BXD1/TyJ m 1454962.0 0.0   1   0.0 0.0 1454962.0, 1454962.0 -0.25
BXD20/TyJ m 1756463.0 0.0   1   0.0 0.0 1756463.0, 1756463.0 0.01
BXD21/TyJ m 463087.0 0.0   1   0.0 0.0 463087.0, 463087.0 -1.08
BXD22/TyJ m 1816137.0 0.0   1   0.0 0.0 1816137.0, 1816137.0 0.06
BXD24/TyJ m 1008443.0 0.0   1   0.0 0.0 1008443.0, 1008443.0 -0.62
BXD24/TyJ-Cep290rd16/J m 1312175.0 0.0   1   0.0 0.0 1312175.0, 1312175.0 -0.37
BXD28/TyJ m 919021.0 242951.0   2   171792.0 0.264 747229.0, 1090814.0 -0.7
BXD29-Tlr4lps-2J/J m 1250449.0 0.0   1   0.0 0.0 1250449.0, 1250449.0 -0.42
BXD2/TyJ m 1248440.0 0.0   1   0.0 0.0 1248440.0, 1248440.0 -0.42
BXD32/TyJ m 359037.0 0.0   1   0.0 0.0 359037.0, 359037.0 -1.17
BXD33/TyJ m 2870850.0 0.0   1   0.0 0.0 2870850.0, 2870850.0 0.94
BXD34/TyJ m 1964013.0 0.0   1   0.0 0.0 1964013.0, 1964013.0 0.18
BXD36/TyJ m 882019.0 0.0   1   0.0 0.0 882019.0, 882019.0 -0.73
BXD38/TyJ m 877294.0 0.0   1   0.0 0.0 877294.0, 877294.0 -0.73
BXD39/TyJ m 1586930.0 0.0   1   0.0 0.0 1586930.0, 1586930.0 -0.14
BXD40/TyJ m 1210023.0 0.0   1   0.0 0.0 1210023.0, 1210023.0 -0.45
BXD42/TyJ m 1722103.0 0.0   1   0.0 0.0 1722103.0, 1722103.0 -0.02
BXD5/TyJ m 1557586.0 0.0   1   0.0 0.0 1557586.0, 1557586.0 -0.16
BXD6/TyJ m 2330943.0 0.0   1   0.0 0.0 2330943.0, 2330943.0 0.49
BXD8/TyJ m 531491.0 0.0   1   0.0 0.0 531491.0, 531491.0 -1.02
BXD9/TyJ m 1875180.0 0.0   1   0.0 0.0 1875180.0, 1875180.0 0.11
BXH10/TyJ m 1996085.0 0.0   1   0.0 0.0 1996085.0, 1996085.0 0.21
BXH19/TyJ m 5976224.0 0.0   1   0.0 0.0 5976224.0, 5976224.0 3.56
BXH20/KccJ m 1884259.0 0.0   1   0.0 0.0 1884259.0, 1884259.0 0.11
BXH22/KccJ m 1125834.0 0.0   1   0.0 0.0 1125834.0, 1125834.0 -0.52
BXH2/TyJ m 2124604.0 0.0   1   0.0 0.0 2124604.0, 2124604.0 0.32
BXH4/TyJ m 1794180.0 67777.0   2   47926.0 0.0378 1746254.0, 1842106.0 0.04
BXH6/TyJ m 2027092.0 0.0   1   0.0 0.0 2027092.0, 2027092.0 0.23
BXH7/TyJ m 4413809.0 0.0   1   0.0 0.0 4413809.0, 4413809.0 2.24
BXH8/TyJ m 2216739.0 0.0   1   0.0 0.0 2216739.0, 2216739.0 0.39
BXH9/TyJ m 1006364.0 0.0   1   0.0 0.0 1006364.0, 1006364.0 -0.62
C3H/HeJ m 1539300.0 252337.0   2   178429.0 0.164 1360871.0, 1717730.0 -0.18
C57BL/6J m 858931.0 665949.0   5 297821.0 0.775 134481.0, 1899539.0 -0.75
C57L/J m 397398.0 0.0   1   0.0 0.0 397398.0, 397398.0 -1.14
C58/J m 3891016.0 0.0   1   0.0 0.0 3891016.0, 3891016.0 1.8
CAST/EiJ m 3251594.0 0.0   1   0.0 0.0 3251594.0, 3251594.0 1.26
CBA/J m 1443367.0 0.0   1   0.0 0.0 1443367.0, 1443367.0 -0.26
CE/J m 1281574.0 0.0   1   0.0 0.0 1281574.0, 1281574.0 -0.39
CXB11/HiAJ m 769517.0 883220.0   2   624531.0 1.15 144986.0, 1394048.0 -0.82
CXB12/HiAJ m 862154.0 0.0   1   0.0 0.0 862154.0, 862154.0 -0.75
CXB13/HiAJ m 1414351.0 689334.0   3 397987.0 0.487 794602.0, 2156793.0 -0.28
CXB1/ByJ m 2344482.0 988630.0   3 570786.0 0.422 1510415.0, 3436525.0 0.5
CXB2/ByJ m 1244887.0 318039.0   2   224888.0 0.255 1019999.0, 1469775.0 -0.42
CXB3/ByJ m 1663066.0 508342.0   2   359452.0 0.306 1303614.0, 2022518.0 -0.07
CXB4/ByJ m 934897.0 612470.0   2   433082.0 0.655 501816.0, 1367979.0 -0.68
CXB6/ByJ m 851524.0 999735.0   2   706919.0 1.17 144604.0, 1558443.0 -0.75
CXB7/ByJ m 1269400.0 46901.0   2   33164.0 0.0369 1236235.0, 1302564.0 -0.4
CXB8/HiAJ m 2604136.0 1814255.0   3 1047460.0 0.697 616645.0, 4171406.0 0.72
CXB9/HiAJ m 270516.0 214051.0   3 123582.0 0.791 27640.0, 431656.0 -1.24
DBA/2J m 1969863.0 1237213.0   4 618607.0 0.628 882105.0, 3749425.0 0.19
FVB/NJ m 1517368.0 0.0   1   0.0 0.0 1517368.0, 1517368.0 -0.19
I/LnJ m 2144256.0 0.0   1   0.0 0.0 2144256.0, 2144256.0 0.33
KK/HlJ m 1287765.0 0.0   1   0.0 0.0 1287765.0, 1287765.0 -0.39
LG/J m 3234344.0 0.0   1   0.0 0.0 3234344.0, 3234344.0 1.25
LP/J m 2034733.0 0.0   1   0.0 0.0 2034733.0, 2034733.0 0.24
MA/MyJ m 1381013.0 0.0   1   0.0 0.0 1381013.0, 1381013.0 -0.31
NOD/ShiLtJ m 1106304.0 0.0   1   0.0 0.0 1106304.0, 1106304.0 -0.54
NON/ShiLtJ m 3847110.0 0.0   1   0.0 0.0 3847110.0, 3847110.0 1.77
NZW/LacJ m 698814.0 0.0   1   0.0 0.0 698814.0, 698814.0 -0.88
PL/J m 2409780.0 0.0   1   0.0 0.0 2409780.0, 2409780.0 0.56
RIIIS/J m 724014.0 0.0   1   0.0 0.0 724014.0, 724014.0 -0.86
SEA/GnJ m 1917883.0 0.0   1   0.0 0.0 1917883.0, 1917883.0 0.14
SJL/J m 3829033.0 0.0   1   0.0 0.0 3829033.0, 3829033.0 1.75
SM/J m 2739470.0 0.0   1   0.0 0.0 2739470.0, 2739470.0 0.83
SWR/J m 1882684.0 0.0   1   0.0 0.0 1882684.0, 1882684.0 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 800583.65 594074.4095 2012206.3963 0.0
AXB19b/PgnJ m 4534801.75 594074.4095 5746424.4963 3323179.0037
AXB24/PgnJ m 896742.25 594074.4095 2108364.9963 0.0
BALB/cJ m 1217847.5333 485059.7242 2207133.3631 228561.7036
BXA16/PgnJ m 918936.9 594074.4095 2130559.6463 0.0
BXD19/TyJ m 1433225.7 594074.4095 2644848.4463 221602.9537
BXD28/TyJ m 919021.4 594074.4095 2130644.1463 0.0
BXH4/TyJ m 1794180.15 594074.4095 3005802.8963 582557.4037
C3H/HeJ m 1539300.2 594074.4095 2750922.9463 327677.4537
C57BL/6J m 858931.1 375725.6467 1625228.6086 92633.5914
CXB11/HiAJ m 769517.35 594074.4095 1981140.0963 0.0
CXB13/HiAJ m 1414350.5667 485059.7242 2403636.3964 425064.7369
CXB1/ByJ m 2344481.7667 485059.7242 3333767.5964 1355195.9369
CXB2/ByJ m 1244886.85 594074.4095 2456509.5963 33264.1037
CXB3/ByJ m 1663065.95 594074.4095 2874688.6963 451443.2037
CXB4/ByJ m 934897.05 594074.4095 2146519.7963 0.0
CXB6/ByJ m 851523.8 594074.4095 2063146.5463 0.0
CXB7/ByJ m 1269399.75 594074.4095 2481022.4963 57777.0037
CXB8/HiAJ m 2604135.8667 485059.7242 3593421.6964 1614850.0369
CXB9/HiAJ m 270516.3 485059.7242 1259802.1297 0.0
DBA/2J m 1969862.725 420074.0435 2826609.3851 1113116.0649




  GWAS USING LINEAR MIXED MODELS