MPD: Phenotype measures mapped to VT:0002160, reproductive system morphology trait

Phenotype measures in Shorter5 associated with ontology term
VT:0002160 'reproductive system morphology trait'

All measures in this list are mapped to the ontology descendants of VT:0002160. None are mapped to VT:0002160 directly.

VT:0002673 sperm quantity
VT:0002997 seminal gland size trait
VT:0010019 epididymis mass
VT:0010042 sperm morphology trait
VT:1000644 testis mass

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Shorter5:2	Shorter5	organ weights	(none)	testis weight [g] testis 110143 left right	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:4	Shorter5	organ weights	(none)	testis weight mean [g] testis_mean 110121	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:5	Shorter5	organ weights	(none)	testis weight as percentage of body weight [%] testis_pct_bw 110122	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:6	Shorter5	organ weights	(none)	epididymis plus vas deferens weight [g] epidid_vd 110145 left right	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:8	Shorter5	organ weights	(none)	epididymis plus vas deferens weight mean [g] epidid_vd_mean 110125	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:9	Shorter5	organ weights	(none)	epididymis plus vas deferens weight as percentage of body weight [%] epidid_vd_pct_bw 110126	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:10	Shorter5	organ weights	(none)	seminal vesicles weight total [g] semin_vesi_tot 110127	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:11	Shorter5	organ weights	(none)	seminal vesicles weight as percentage of body weight [%] semin_vesi_pct_bw 110128	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:12	Shorter5	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_count 110129	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:13	Shorter5	sperm count	(none)	sperm count per mg testis weight (x 10³) [n/mg] sperm_adj 110130	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:22	Shorter5	histopathology	(none)	percentage of sperm with normal morphology [%] normal_sperm 110139	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:23	Shorter5	histopathology	(none)	percentage of sperm with abnormal head shape [%] abnormal_head 110140	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:24	Shorter5	histopathology	(none)	percentage of sperm with abnormal tail bending [%] abnormal_tail 110141	CC RIX	28	m	7-44wks	N=4	2019

Shorter5:25	Shorter5	histopathology	(none)	percentage of sperm with broken tails [%] broken_tail 110142	CC RIX	28	m	7-44wks	N=4	2019

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