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Project measure / variable:   Schwartz2   pctEOS_ctrl24

ID, description, units MPD:9802   pctEOS_ctrl24   alveolar eosinophils (percentage of total lavage cells), 24h post-challenge   [%]  control  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar eosinophils (percentage of total lavage cells), 24h post-challenge control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means1.21   %
Median of the strain means0.450   %
SD of the strain means± 1.99
Coefficient of variation (CV)1.64
Min–max range of strain means0   –   5.80   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 138.4438 19.7777 15.6268 < 0.0001
Residuals 32 40.5 1.2656


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.9 0.652   5 0.292 0.724 -0.16
A/J m 0.0 0.0   5 0.0 0.0 -0.61
BALB/cJ m 2.0 1.58   5 0.707 0.791 0.4
BTBR T+ Itpr3tf/J m 5.8 2.28   5 1.02 0.393 3.0, 8.0 2.31
C3H/HeJ m 0.0 0.0   5 0.0 0.0 -0.61
C57BL/6J m 0.0 0.0   5 0.0 0.0 -0.61
DBA/2J m 1.0 1.41   5 0.632 1.41 -0.11
FVB/NJ m 0.0 0.0   5 0.0 0.0 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.9 0.5031 1.9248 -0.1248
A/J m 0.0 0.5031 1.0248 -1.0248
BALB/cJ m 2.0 0.5031 3.0248 0.9752
BTBR T+ Itpr3tf/J m 5.8 0.5031 6.8248 4.7752
C3H/HeJ m 0.0 0.5031 1.0248 -1.0248
C57BL/6J m 0.0 0.5031 1.0248 -1.0248
DBA/2J m 1.0 0.5031 2.0248 -0.0248
FVB/NJ m 0.0 0.5031 1.0248 -1.0248




  GWAS USING LINEAR MIXED MODELS