Project measure / variable:   Brinkmeyer1   periphery_time_t1

ID, description, units MPD:64459   periphery_time_t1   time spent in periphery, 30 min test, post infection wk 3   [s]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - time spent in periphery, 30 min test, post infection wk 3 trial 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means1342.0   s 1572.0   s
Median of the strain means1394.0   s 1684.0   s
SD of the strain means± 193.3 ± 211.5
Coefficient of variation (CV)0.1441 0.1346
Min–max range of strain means1128.0   –   1504.0   s 1328.0   –   1704.0   s
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 30976.0 30976.0 1.0893 0.4062
Residuals 2 56873.0 28436.5


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc m 1684.0 0.0   1   0.0 0.0 1684.0, 1684.0 0.53
CC016/GeniUnc f 1128.0 51.62   2   36.5 0.0457 1092.0, 1165.0 -1.11
CC019/TauUnc f 1394.0 0.0   1   0.0 0.0 1394.0, 1394.0 0.27
CC019/TauUnc m 1704.0 82.83   3 47.823 0.0486 1613.0, 1775.0 0.62
CC061/GeniUnc f 1504.0 27.577   2   19.5 0.0183 1484.0, 1523.0 0.84
CC061/GeniUnc m 1328.0 236.9   2   167.5 0.1784 1160.0, 1495.0 -1.15




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA