Project measure / variable:   Brinkmeyer1   vert_activity_t1

ID, description, units MPD:64447   vert_activity_t1   number of vertical plane entries, 30 min test, post infection wk 3   [n]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - number of vertical plane entries, 30 min test, post infection wk 3 trial 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means60.5   n 45.0   n
Median of the strain means67.5   n 41.0   n
SD of the strain means± 57.32 ± 24.249
Coefficient of variation (CV)0.9475 0.5389
Min–max range of strain means0.0   –   114.0   n 23.0   –   71.0   n
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12.25 12.25 0.0023 0.9662
Residuals 2 10712.5 5356.25


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc m 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.16
CC016/GeniUnc f 0.0 0.0   2   0.0 None -1.06
CC019/TauUnc f 114.0 0.0   1   0.0 0.0 114.0, 114.0 0.93
CC019/TauUnc m 23.0 38.974   3 22.502 1.6945 -0.91
CC061/GeniUnc f 67.5 50.2   2   35.5 0.7438 32.0, 103.0 0.12
CC061/GeniUnc m 71.0 90.51   2   64.0 1.2748 7.0, 135.0 1.07




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA