Project measure / variable:   Brinkmeyer1   bw_d4

ID, description, units MPD:64403   bw_d4   body weight, post infection   [g]  day 4  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   5 strains     sex: both     age: 4wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - body weight, post infection day 4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains4 strains
Mean of the strain means12.802   g 15.133   g
Median of the strain means14.167   g 16.04   g
SD of the strain means± 2.8463 ± 2.0078
Coefficient of variation (CV)0.2223 0.1327
Min–max range of strain means9.65   –   15.45   g 12.133   –   16.32   g
Mean sample size per strain4.6   mice 4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 24.2494 24.2494 8.3175 0.0071
strain 3 174.1959 58.0653 19.9162 < 0.0001
sex:strain 3 4.4785 1.4928 0.512 0.677
Residuals 31 90.3798 2.9155


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc f 15.45 2.192   2   1.55 0.1419 13.9, 17.0 0.93
CC013/GeniUnc m 16.18 2.3317   5 1.0428 0.1441 12.8, 18.9 0.52
CC016/GeniUnc f 9.8 1.1314   2   0.8 0.1154 9.0, 10.6 -1.05
CC019/TauUnc f 9.65 1.033   6 0.4217 0.107 8.1, 11.2 -1.11
CC019/TauUnc m 12.133 1.1003   6 0.4492 0.0907 10.0, 13.1 -1.49
CC041/TauUnc f 14.943 1.2109   7 0.45766 0.081 13.6, 17.0 0.75
CC041/TauUnc m 15.9 0.14142   2   0.1 0.0089 15.8, 16.0 0.38
CC061/GeniUnc f 14.167 2.5089   6 1.0243 0.1771 10.9, 18.0 0.48
CC061/GeniUnc m 16.32 1.7427   5 0.77936 0.1068 14.4, 18.4 0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC013/GeniUnc f 15.45 1.2073685698 17.9124444328 12.9875555672
CC013/GeniUnc m 16.18 0.7636069312 17.7373866039 14.6226133961
CC019/TauUnc f 9.65 0.6970745688 11.0716929562 8.2283070438
CC019/TauUnc m 12.1333333333 0.6970745688 13.5550262895 10.7116403772
CC041/TauUnc f 14.9428571429 0.6453656468 16.2590890574 13.6266252283
CC041/TauUnc m 15.9 1.2073685698 18.3624444328 13.4375555672
CC061/GeniUnc f 14.1666666667 0.6970745688 15.5883596228 12.7449737105
CC061/GeniUnc m 16.32 0.7636069312 17.8773866039 14.7626133961


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC013/GeniUnc both 15.815 0.7142888786 17.2718017726 14.3581982274
CC019/TauUnc both 10.8916666667 0.4929061546 11.8969553967 9.8863779366
CC041/TauUnc both 15.4214285714 0.6845136378 16.81750334 14.0253538029
CC061/GeniUnc both 15.2433333333 0.5169643362 16.2976890484 14.1889776183




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA