Project measure / variable:   Graham1   WNV_IgM_d21

ID, description, units MPD:63363   WNV_IgM_d21   virus-specific IgM in serum, post infection   [ng/mL]  day 21  
West Nile virus study
Data set, strains Graham1   CC RIX   4 strains     sex: m     age: 8-10wks
Procedure immunoglobulin quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Graham1 - virus-specific IgM in serum, post infection day 21



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested4 strains
Mean of the strain means26.134   ng/mL
Median of the strain means27.693   ng/mL
SD of the strain means± 9.4445
Coefficient of variation (CV)0.3614
Min–max range of strain means13.543   –   35.606   ng/mL
Mean sample size per strain2.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 783.0756 261.0252 2.2231 0.1731
Residuals 7 821.9044 117.4149


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 13.543 0.43752   3 0.2526 0.0323 13.18481, 14.03046 -1.33
RIX:CC(005 x 001) m 30.384 1.0893   2   0.77028 0.0359 29.61356, 31.15412 0.45
RIX:CC(017 x 004) m 35.606 18.926   3 10.927 0.5315 23.44465, 57.41084 1.0
RIX:CC(041 x 012) m 25.001 7.2098   3 4.1626 0.2884 18.81975, 32.92146 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 13.5427 6.2561 28.3359 -1.2505
RIX:CC(005 x 001) m 30.3838 7.6621 48.5018 12.2659
RIX:CC(017 x 004) m 35.6056 6.2561 50.3988 20.8123
RIX:CC(041 x 012) m 25.0014 6.2561 39.7946 10.2081




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA