Project measure / variable:   Graham1   NS4b_spleen_d21

ID, description, units MPD:63359   NS4b_spleen_d21   percentage of CD3+ T cells that are NS4b+ in spleen, post infection   [%]  day 21  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are NS4b+ in spleen, post infection day 21



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means1.472   %
Median of the strain means1.472   %
SD of the strain means± 1.9064
Coefficient of variation (CV)1.2951
Min–max range of strain means0.12393   –   2.82   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 10.9032 10.9032 18.5468 0.0126
Residuals 4 2.3515 0.5879


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 2.82 1.0812   3 0.62421 0.3834 2.02, 4.05 0.71
RIX:CC(041 x 012) m 0.12393 0.08275   3 0.04777 0.6677 0.0478, 0.212 -0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 2.82 0.4426712876 4.0490525297 1.5909474703
RIX:CC(041 x 012) m 0.1239333333 0.4426712876 1.3529858631 -1.1051191964




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA