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Project measure / variable:   Graham1   NS4b_spleen_d7

ID, description, units MPD:63357   NS4b_spleen_d7   percentage of CD3+ T cells that are NS4b+ in spleen, post infection   [%]  day 7  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are NS4b+ in spleen, post infection day 7



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means4.3953   %
Median of the strain means4.3953   %
SD of the strain means± 5.0082
Coefficient of variation (CV)1.1394
Min–max range of strain means0.854   –   7.9367   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 75.2463 75.2463 12.4493 0.0243
Residuals 4 24.1768 6.0442


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 7.9367 3.4598   3 1.9975 0.4359 5.52, 11.9 0.71
RIX:CC(041 x 012) m 0.854 0.34374   3 0.19846 0.4025 0.538, 1.22 -0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 7.9366666667 1.419412398 11.8775872713 3.995746062
RIX:CC(041 x 012) m 0.854 1.419412398 4.7949206046 -3.0869206046




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA