Project measure / variable:   GMC14   body_length

ID, description, units MPD:56302   body_length   body length   [mm]  
Data set, strains GMC14   inbred w/CC8   8 strains     sex: both     age: 14-16wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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GMC14 - body length



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means92.0   mm 95.6   mm
Median of the strain means92.2   mm 95.9   mm
SD of the strain means± 7.12 ± 8.11
Coefficient of variation (CV)0.0774 0.0848
Min–max range of strain means78.2   –   103   mm 80.5   –   109   mm
Mean sample size per strain13.6   mice 12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 985.723 985.723 73.6095 < 0.0001
strain 7 13260.6434 1894.3776 141.4639 < 0.0001
sex:strain 7 65.4916 9.3559 0.6987 0.6732
Residuals 196 2624.6844 13.3912


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 94.2 5.37   16 1.34 0.057 86.0, 105.0 0.32
129S1/SvImJ m 97.3 6.81   16 1.7 0.07 89.0, 111.0 0.21
A/J f 91.4 2.94   16 0.736 0.0322 86.0, 98.0 -0.08
A/J m 94.6 3.01   16 0.752 0.0318 89.0, 100.0 -0.12
C57BL/6J f 93.1 3.3   16 0.824 0.0354 88.0, 98.0 0.16
C57BL/6J m 98.1 2.86   16 0.716 0.0292 91.0, 103.0 0.31
CAST/EiJ f 78.2 2.5   19 0.574 0.032 75.0, 84.0 -1.93
CAST/EiJ m 80.5 2.5   16 0.626 0.0311 77.0, 85.0 -1.86
NOD/ShiLtJ f 96.7 2.89   18 0.681 0.0299 90.0, 100.0 0.67
NOD/ShiLtJ m 100.0 2.37   16 0.591 0.0236 96.0, 105.0 0.54
NZO/HlLtJ f 103.0 3.13   16 0.783 0.0303 100.0, 110.0 1.55
NZO/HlLtJ m 109.0 3.38   17 0.819 0.031 103.0, 115.0 1.65
PWK/PhJ f 88.5 6.45   4 3.23 0.0729 83.0, 97.0 -0.48
PWK/PhJ m 91.0 2.83   2   2.0 0.0311 89.0, 93.0 -0.57
WSB/EiJ f 90.5 3.7   4 1.85 0.0408 86.0, 94.0 -0.2
WSB/EiJ m 94.2 1.71   4 0.854 0.0181 92.0, 96.0 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 94.25 0.9149 96.0542 92.4458
129S1/SvImJ m 97.3125 0.9149 99.1167 95.5083
A/J f 91.4375 0.9149 93.2417 89.6333
A/J m 94.625 0.9149 96.4292 92.8208
C57BL/6J f 93.0625 0.9149 94.8667 91.2583
C57BL/6J m 98.0625 0.9149 99.8667 96.2583
CAST/EiJ f 78.1579 0.8395 79.8136 76.5022
CAST/EiJ m 80.5 0.9149 82.3042 78.6958
NOD/ShiLtJ f 96.6667 0.8625 98.3677 94.9656
NOD/ShiLtJ m 100.4375 0.9149 102.2417 98.6333
NZO/HlLtJ f 103.25 0.9149 105.0542 101.4458
NZO/HlLtJ m 108.8235 0.8875 110.5739 107.0732
PWK/PhJ f 88.5 1.8297 92.1084 84.8916
PWK/PhJ m 91.0 2.5876 96.1031 85.8969
WSB/EiJ f 90.5 1.8297 94.1084 86.8916
WSB/EiJ m 94.25 1.8297 97.8584 90.6416


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 95.7812 0.6469 97.057 94.5055
A/J both 93.0312 0.6469 94.307 91.7555
C57BL/6J both 95.5625 0.6469 96.8383 94.2867
CAST/EiJ both 79.3289 0.6208 80.5533 78.1046
NOD/ShiLtJ both 98.5521 0.6287 99.7919 97.3123
NZO/HlLtJ both 106.0368 0.6373 107.2936 104.7799
PWK/PhJ both 89.75 1.5846 92.875 86.625
WSB/EiJ both 92.375 1.2938 94.9265 89.8235




  GWAS USING LINEAR MIXED MODELS