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Project measure / variable:   GMC14   bw

ID, description, units MPD:56301   bw   body weight   [g]  
Data set, strains GMC14   inbred w/CC8   8 strains     sex: both     age: 14-16wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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GMC14 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means23.0   g 27.7   g
Median of the strain means21.1   g 25.5   g
SD of the strain means± 10.8 ± 11.7
Coefficient of variation (CV)0.471 0.422
Min–max range of strain means14.1   –   48.5   g 17.4   –   53.9   g
Mean sample size per strain13.6   mice 12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1829.824 1829.824 355.6778 < 0.0001
strain 7 25785.7398 3683.6771 716.0264 < 0.0001
sex:strain 7 159.62 22.8029 4.4324 0.0001
Residuals 196 1008.3438 5.1446


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.6 1.38   16 0.344 0.0636 18.7, 24.2 -0.13
129S1/SvImJ m 26.4 2.78   16 0.696 0.105 23.5, 33.1 -0.11
A/J f 20.7 1.05   16 0.263 0.0509 18.5, 22.7 -0.21
A/J m 24.7 1.3   16 0.326 0.0529 22.2, 27.4 -0.26
C57BL/6J f 21.6 1.18   16 0.295 0.0546 20.3, 24.0 -0.13
C57BL/6J m 29.6 1.92   16 0.479 0.0647 26.7, 32.6 0.16
CAST/EiJ f 14.1 0.835   19 0.192 0.0594 12.7, 15.7 -0.82
CAST/EiJ m 17.4 1.08   16 0.271 0.0623 14.4, 19.0 -0.88
NOD/ShiLtJ f 24.4 2.73   18 0.644 0.112 15.9, 27.5 0.13
NOD/ShiLtJ m 31.1 2.27   16 0.569 0.0731 28.4, 35.4 0.29
NZO/HlLtJ f 48.5 3.65   16 0.913 0.0753 41.6, 54.9 2.35
NZO/HlLtJ m 53.9 4.27   17 1.03 0.0791 44.9, 59.3 2.24
PWK/PhJ f 16.2 0.797   4 0.399 0.0491 15.2, 17.1 -0.63
PWK/PhJ m 20.4 0.354   2   0.25 0.0174 20.1, 20.6 -0.63
WSB/EiJ f 17.1 2.13   4 1.06 0.125 14.5, 19.7 -0.55
WSB/EiJ m 18.3 1.07   4 0.535 0.0585 16.9, 19.5 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 21.65 0.567 22.7683 20.5317
129S1/SvImJ m 26.425 0.567 27.5433 25.3067
A/J f 20.6813 0.567 21.7995 19.563
A/J m 24.6813 0.567 25.7995 23.563
C57BL/6J f 21.6313 0.567 22.7495 20.513
C57BL/6J m 29.65 0.567 30.7683 28.5317
CAST/EiJ f 14.0579 0.5204 15.0841 13.0317
CAST/EiJ m 17.4063 0.567 18.5245 16.288
NOD/ShiLtJ f 24.3889 0.5346 25.4432 23.3346
NOD/ShiLtJ m 31.1 0.567 32.2183 29.9817
NZO/HlLtJ f 48.4938 0.567 49.612 47.3755
NZO/HlLtJ m 53.9294 0.5501 55.0143 52.8445
PWK/PhJ f 16.225 1.1341 18.4616 13.9884
PWK/PhJ m 20.35 1.6038 23.513 17.187
WSB/EiJ f 17.1 1.1341 19.3366 14.8634
WSB/EiJ m 18.3 1.1341 20.5366 16.0634


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.0375 0.401 24.8283 23.2467
A/J both 22.6813 0.401 23.472 21.8905
C57BL/6J both 25.6406 0.401 26.4314 24.8499
CAST/EiJ both 15.7321 0.3848 16.491 14.9732
NOD/ShiLtJ both 27.7444 0.3897 28.5129 26.976
NZO/HlLtJ both 51.2116 0.395 51.9906 50.4325
PWK/PhJ both 18.2875 0.9821 20.2244 16.3506
WSB/EiJ both 17.7 0.8019 19.2815 16.1185




  GWAS USING LINEAR MIXED MODELS