Project measure / variable:   GMC10   bw_19wk

ID, description, units MPD:55902   bw_19wk   body weight   [g]  at age 18-19wks  
Data set, strains GMC10   inbred w/CC8   8 strains     sex: both     age: 18-19wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC10 - body weight at age 18-19wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means23.9   g 28.6   g
Median of the strain means21.6   g 26.2   g
SD of the strain means± 12.4 ± 11.8
Coefficient of variation (CV)0.517 0.414
Min–max range of strain means14.1   –   53.1   g 18.2   –   55.1   g
Mean sample size per strain16.2   mice 15.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1482.2183 1482.2183 175.8854 < 0.0001
strain 7 32548.4859 4649.7837 551.7601 < 0.0001
sex:strain 7 207.3621 29.6232 3.5152 0.0013
Residuals 241 2030.9514 8.4272


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.6 1.29   16 0.323 0.0573 19.8, 24.4 -0.1
129S1/SvImJ m 27.4 2.42   16 0.605 0.0881 24.5, 33.0 -0.1
A/J f 20.7 1.06   16 0.265 0.0513 19.0, 22.6 -0.26
A/J m 25.0 1.19   16 0.298 0.0477 23.2, 27.6 -0.3
C57BL/6J f 22.7 1.6   16 0.4 0.0703 20.7, 25.6 -0.1
C57BL/6J m 30.6 1.66   16 0.416 0.0544 28.5, 33.5 0.17
CAST/EiJ f 14.1 0.945   17 0.229 0.0672 13.0, 16.0 -0.79
CAST/EiJ m 18.2 0.957   16 0.239 0.0526 16.1, 20.1 -0.88
NOD/ShiLtJ f 24.3 3.07   17 0.744 0.126 17.4, 28.5 0.03
NOD/ShiLtJ m 31.5 2.08   16 0.52 0.0661 28.4, 35.5 0.25
NZO/HlLtJ f 53.1 3.56   16 0.891 0.0672 47.1, 60.4 2.36
NZO/HlLtJ m 55.1 8.77   16 2.19 0.159 35.7, 65.3 2.24
PWK/PhJ f 18.5 1.49   16 0.372 0.0804 15.9, 20.4 -0.44
PWK/PhJ m 22.2 2.32   15 0.599 0.104 18.8, 26.4 -0.54
WSB/EiJ f 15.1 2.44   16 0.61 0.161 11.9, 19.6 -0.71
WSB/EiJ m 18.6 0.944   16 0.236 0.0508 16.2, 19.8 -0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.5563 0.7257 23.9859 21.1266
129S1/SvImJ m 27.4438 0.7257 28.8734 26.0141
A/J f 20.7 0.7257 22.1296 19.2704
A/J m 24.9688 0.7257 26.3984 23.5391
C57BL/6J f 22.7375 0.7257 24.1671 21.3079
C57BL/6J m 30.55 0.7257 31.9796 29.1204
CAST/EiJ f 14.0588 0.7041 15.4457 12.6719
CAST/EiJ m 18.2063 0.7257 19.6359 16.7766
NOD/ShiLtJ f 24.3294 0.7041 25.7163 22.9425
NOD/ShiLtJ m 31.4563 0.7257 32.8859 30.0266
NZO/HlLtJ f 53.0625 0.7257 54.4921 51.6329
NZO/HlLtJ m 55.0813 0.7257 56.5109 53.6516
PWK/PhJ f 18.5 0.7257 19.9296 17.0704
PWK/PhJ m 22.2067 0.7495 23.6832 20.7302
WSB/EiJ f 15.1187 0.7257 16.5484 13.6891
WSB/EiJ m 18.6 0.7257 20.0296 17.1704


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.0 0.5132 26.0109 23.9891
A/J both 22.8344 0.5132 23.8453 21.8235
C57BL/6J both 26.6438 0.5132 27.6546 25.6329
CAST/EiJ both 16.1325 0.5056 17.1284 15.1366
NOD/ShiLtJ both 27.8928 0.5056 28.8887 26.8969
NZO/HlLtJ both 54.0719 0.5132 55.0828 53.061
PWK/PhJ both 20.3533 0.5217 21.3809 19.3257
WSB/EiJ both 16.8594 0.5132 17.8703 15.8485




  GWAS USING LINEAR MIXED MODELS