Project measure / variable:   GMC09   breaks_YA_mean

ID, description, units MPD:55854   breaks_YA_mean   mean ambulatory movement on Y-axis, 21 h test, 15 min bins   [n]  
Data set, strains GMC09   inbred w/CC8   8 strains     sex: both     age: 12-13wks
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  STRAIN COMPARISON PLOT
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GMC09 - mean ambulatory movement on Y-axis, 21 h test, 15 min bins



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means841   n 626   n
Median of the strain means929   n 770   n
SD of the strain means± 550 ± 315
Coefficient of variation (CV)0.654 0.503
Min–max range of strain means150   –   1898   n 126   –   965   n
Mean sample size per strain17.5   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3653637.3893 3653637.3893 10.7132 0.0012
strain 7 40432932.6824 5776133.2403 16.9368 < 0.0001
sex:strain 7 7707919.2418 1101131.3203 3.2287 0.0027
Residuals 255 86965232.8833 341040.129


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 150.0 75.9   16 19.0 0.507 36.4, 293.0 -1.26
129S1/SvImJ m 126.0 80.8   16 20.2 0.641 25.2, 260.0 -1.59
A/J f 424.0 99.3   16 24.8 0.234 290.0, 596.0 -0.76
A/J m 435.0 178.0   16 44.6 0.411 151.0, 698.0 -0.61
C57BL/6J f 925.0 231.0   16 57.7 0.25 623.0, 1260.0 0.15
C57BL/6J m 725.0 194.0   16 48.6 0.268 465.0, 1063.0 0.31
CAST/EiJ f 1102.0 703.0   19 161.0 0.638 426.0, 3713.0 0.48
CAST/EiJ m 872.0 251.0   14 67.1 0.288 515.0, 1297.0 0.78
NOD/ShiLtJ f 1898.0 1769.0   18 417.0 0.932 608.0, 6475.0 1.92
NOD/ShiLtJ m 826.0 177.0   16 44.2 0.214 424.0, 1152.0 0.63
NZO/HlLtJ f 340.0 193.0   17 46.9 0.569 116.0, 741.0 -0.91
NZO/HlLtJ m 243.0 101.0   17 24.5 0.416 105.0, 442.0 -1.22
PWK/PhJ f 933.0 277.0   20 62.0 0.297 468.0, 1557.0 0.17
PWK/PhJ m 965.0 323.0   20 72.1 0.334 423.0, 1897.0 1.08
WSB/EiJ f 953.0 428.0   18 101.0 0.449 348.0, 2137.0 0.2
WSB/EiJ m 816.0 970.0   16 242.0 1.19 342.0, 4385.0 0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 149.6875 145.9966 437.2002 -137.8252
129S1/SvImJ m 125.9937 145.9966 413.5064 -161.5189
A/J f 423.6938 145.9966 711.2064 136.1811
A/J m 434.525 145.9966 722.0377 147.0123
C57BL/6J f 924.5875 145.9966 1212.1002 637.0748
C57BL/6J m 725.1437 145.9966 1012.6564 437.6311
CAST/EiJ f 1101.7895 133.9757 1365.6292 837.9498
CAST/EiJ m 871.6357 156.0769 1178.9997 564.2718
NOD/ShiLtJ f 1898.0389 137.6469 2169.1084 1626.9694
NOD/ShiLtJ m 825.75 145.9966 1113.2627 538.2373
NZO/HlLtJ f 340.2176 141.6375 619.1459 61.2894
NZO/HlLtJ m 243.2882 141.6375 522.2165 -35.64
PWK/PhJ f 933.37 130.5833 1190.5291 676.2109
PWK/PhJ m 965.125 130.5833 1222.2841 707.9659
WSB/EiJ f 953.2222 137.6469 1224.2918 682.1527
WSB/EiJ m 815.9687 145.9966 1103.4814 528.4561


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 137.8406 103.2352 341.1428 -65.4615
A/J both 429.1094 103.2352 632.4115 225.8072
C57BL/6J both 824.8656 103.2352 1028.1678 621.5635
CAST/EiJ both 986.7126 102.8464 1189.249 784.1762
NOD/ShiLtJ both 1361.8944 100.3266 1559.4686 1164.3203
NZO/HlLtJ both 291.7529 100.1528 488.985 94.5209
PWK/PhJ both 949.2475 92.3364 1131.0865 767.4085
WSB/EiJ both 884.5955 100.3266 1082.1697 687.0213




  GWAS USING LINEAR MIXED MODELS