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Project measure / variable:   GMC09   RER_mean

ID, description, units MPD:55833   RER_mean   mean respiratory exchange rate, 21 h test, 15 min bins   [ratio]  
Data set, strains GMC09   inbred w/CC8   8 strains     sex: both     age: 12-13wks
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  STRAIN COMPARISON PLOT
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GMC09 - mean respiratory exchange rate, 21 h test, 15 min bins



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0.840   ratio 0.848   ratio
Median of the strain means0.835   ratio 0.841   ratio
SD of the strain means± 0.0470 ± 0.0464
Coefficient of variation (CV)0.0559 0.0547
Min–max range of strain means0.786   –   0.937   ratio 0.773   –   0.913   ratio
Mean sample size per strain17.5   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0027 0.0027 0.4237 0.5157
strain 7 0.427 0.061 9.4541 < 0.0001
sex:strain 7 0.0554 0.0079 1.2275 0.2879
Residuals 255 1.6452 0.0065


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.786 0.0412   16 0.0103 0.0525 0.729, 0.871 -1.16
129S1/SvImJ m 0.773 0.0372   16 0.0093 0.0481 0.735, 0.856 -1.61
A/J f 0.797 0.0603   16 0.0151 0.0757 0.739, 0.959 -0.92
A/J m 0.804 0.0596   16 0.0149 0.0741 0.724, 0.91 -0.94
C57BL/6J f 0.937 0.049   16 0.0122 0.0523 0.866, 1.03 2.06
C57BL/6J m 0.898 0.0652   16 0.0163 0.0726 0.755, 1.01 1.09
CAST/EiJ f 0.842 0.185   19 0.0425 0.22 0.091, 0.938 0.03
CAST/EiJ m 0.913 0.0719   14 0.0192 0.0787 0.794, 1.06 1.41
NOD/ShiLtJ f 0.867 0.0443   18 0.0104 0.051 0.777, 0.933 0.57
NOD/ShiLtJ m 0.872 0.0443   16 0.0111 0.0509 0.776, 0.963 0.53
NZO/HlLtJ f 0.827 0.0414   17 0.01 0.0501 0.748, 0.901 -0.28
NZO/HlLtJ m 0.84 0.0432   17 0.0105 0.0515 0.773, 0.92 -0.16
PWK/PhJ f 0.821 0.137   20 0.0306 0.166 0.733, 1.39 -0.41
PWK/PhJ m 0.839 0.0842   20 0.0188 0.1 0.746, 1.08 -0.19
WSB/EiJ f 0.846 0.0669   18 0.0158 0.0791 0.751, 1.0 0.12
WSB/EiJ m 0.842 0.0361   16 0.00904 0.0429 0.768, 0.903 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.7858 0.0201 0.8254 0.7463
129S1/SvImJ m 0.7733 0.0201 0.8129 0.7338
A/J f 0.7972 0.0201 0.8367 0.7576
A/J m 0.8044 0.0201 0.8439 0.7648
C57BL/6J f 0.9369 0.0201 0.9764 0.8973
C57BL/6J m 0.8982 0.0201 0.9378 0.8587
CAST/EiJ f 0.8421 0.0184 0.8784 0.8058
CAST/EiJ m 0.9135 0.0215 0.9558 0.8712
NOD/ShiLtJ f 0.8671 0.0189 0.9043 0.8298
NOD/ShiLtJ m 0.8718 0.0201 0.9114 0.8323
NZO/HlLtJ f 0.8268 0.0195 0.8651 0.7884
NZO/HlLtJ m 0.8405 0.0195 0.8788 0.8021
PWK/PhJ f 0.8212 0.018 0.8566 0.7859
PWK/PhJ m 0.8387 0.018 0.8741 0.8033
WSB/EiJ f 0.8455 0.0189 0.8828 0.8082
WSB/EiJ m 0.8425 0.0201 0.882 0.803


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.7796 0.0142 0.8075 0.7516
A/J both 0.8008 0.0142 0.8287 0.7728
C57BL/6J both 0.9176 0.0142 0.9455 0.8896
CAST/EiJ both 0.8778 0.0141 0.9057 0.8499
NOD/ShiLtJ both 0.8694 0.0138 0.8966 0.8423
NZO/HlLtJ both 0.8336 0.0138 0.8607 0.8065
PWK/PhJ both 0.83 0.0127 0.855 0.805
WSB/EiJ both 0.844 0.0138 0.8712 0.8168




  GWAS USING LINEAR MIXED MODELS