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Project measure / variable:   GMC03   bite_evidence

ID, description, units MPD:55225   bite_evidence   evidence of biting (0=not aggressive, 1=aggressive)   [score]  
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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GMC03 - evidence of biting (0=not aggressive, 1=aggressive)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0.0486   score 0.0813   score
Median of the strain means0   score 0.0294   score
SD of the strain means± 0.138 ± 0.149
Coefficient of variation (CV)2.83 1.83
Min–max range of strain means0   –   0.389   score 0   –   0.438   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0658 0.0658 1.436 0.2319
strain 7 4.7625 0.6804 14.8499 < 0.0001
sex:strain 7 0.0856 0.0122 0.267 0.9662
Residuals 260 11.9121 0.0458


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   16 0.0 0.0 -0.35
129S1/SvImJ m 0.0 0.0   16 0.0 0.0 -0.55
A/J f 0.0 0.0   16 0.0 0.0 -0.35
A/J m 0.0 0.0   16 0.0 0.0 -0.55
C57BL/6J f 0.0 0.0   16 0.0 0.0 -0.35
C57BL/6J m 0.0 0.0   16 0.0 0.0 -0.55
CAST/EiJ f 0.0 0.0   19 0.0 0.0 -0.35
CAST/EiJ m 0.0588 0.243   17 0.0588 4.12 -0.15
NOD/ShiLtJ f 0.0 0.0   18 0.0 0.0 -0.35
NOD/ShiLtJ m 0.0625 0.25   16 0.0625 4.0 -0.13
NZO/HlLtJ f 0.0 0.0   17 0.0 0.0 -0.35
NZO/HlLtJ m 0.0 0.0   17 0.0 0.0 -0.55
PWK/PhJ f 0.0 0.0   20 0.0 0.0 -0.35
PWK/PhJ m 0.0909 0.294   22 0.0627 3.24 0.06
WSB/EiJ f 0.389 0.502   18 0.118 1.29 2.47
WSB/EiJ m 0.438 0.512   16 0.128 1.17 2.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.0535 0.1054 -0.1054
129S1/SvImJ m 0.0 0.0535 0.1054 -0.1054
A/J f 0.0 0.0535 0.1054 -0.1054
A/J m 0.0 0.0535 0.1054 -0.1054
C57BL/6J f 0.0 0.0535 0.1054 -0.1054
C57BL/6J m 0.0 0.0535 0.1054 -0.1054
CAST/EiJ f 0.0 0.0491 0.0967 -0.0967
CAST/EiJ m 0.0588 0.0519 0.161 -0.0434
NOD/ShiLtJ f 0.0 0.0505 0.0993 -0.0993
NOD/ShiLtJ m 0.0625 0.0535 0.1679 -0.0429
NZO/HlLtJ f 0.0 0.0519 0.1022 -0.1022
NZO/HlLtJ m 0.0 0.0519 0.1022 -0.1022
PWK/PhJ f 0.0 0.0479 0.0942 -0.0942
PWK/PhJ m 0.0909 0.0456 0.1808 0.001
WSB/EiJ f 0.3889 0.0505 0.4882 0.2895
WSB/EiJ m 0.4375 0.0535 0.5429 0.3321


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 0.0378 0.0745 -0.0745
A/J both 0.0 0.0378 0.0745 -0.0745
C57BL/6J both 0.0 0.0378 0.0745 -0.0745
CAST/EiJ both 0.0294 0.0357 0.0998 -0.0409
NOD/ShiLtJ both 0.0312 0.0368 0.1037 -0.0412
NZO/HlLtJ both 0.0 0.0367 0.0723 -0.0723
PWK/PhJ both 0.0455 0.0331 0.1106 -0.0197
WSB/EiJ both 0.4132 0.0368 0.4856 0.3408




  GWAS USING LINEAR MIXED MODELS