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Project measure / variable:   GMC03   tremor

ID, description, units MPD:55223   tremor   tremor (0=absent, 1=present)   [score]  
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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GMC03 - tremor (0=absent, 1=present)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0   score 0.00735   score
Median of the strain means0   score 0   score
SD of the strain means± 0 ± 0.0208
Coefficient of variation (CV)0 2.83
Min–max range of strain means0   –   0   score 0   –   0.0588   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0037 0.0037 1.0303 0.311
strain 7 0.0257 0.0037 1.0138 0.4218
sex:strain 7 0.0258 0.0037 1.0175 0.4192
Residuals 260 0.9412 0.0036


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   16 0.0 0.0 0.0
129S1/SvImJ m 0.0 0.0   16 0.0 0.0 -0.35
A/J f 0.0 0.0   16 0.0 0.0 0.0
A/J m 0.0 0.0   16 0.0 0.0 -0.35
C57BL/6J f 0.0 0.0   16 0.0 0.0 0.0
C57BL/6J m 0.0 0.0   16 0.0 0.0 -0.35
CAST/EiJ f 0.0 0.0   19 0.0 0.0 0.0
CAST/EiJ m 0.0 0.0   17 0.0 0.0 -0.35
NOD/ShiLtJ f 0.0 0.0   18 0.0 0.0 0.0
NOD/ShiLtJ m 0.0 0.0   16 0.0 0.0 -0.35
NZO/HlLtJ f 0.0 0.0   17 0.0 0.0 0.0
NZO/HlLtJ m 0.0588 0.243   17 0.0588 4.12 2.47
PWK/PhJ f 0.0 0.0   20 0.0 0.0 0.0
PWK/PhJ m 0.0 0.0   22 0.0 0.0 -0.35
WSB/EiJ f 0.0 0.0   18 0.0 0.0 0.0
WSB/EiJ m 0.0 0.0   16 0.0 0.0 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.015 0.0296 -0.0296
129S1/SvImJ m 0.0 0.015 0.0296 -0.0296
A/J f 0.0 0.015 0.0296 -0.0296
A/J m 0.0 0.015 0.0296 -0.0296
C57BL/6J f 0.0 0.015 0.0296 -0.0296
C57BL/6J m 0.0 0.015 0.0296 -0.0296
CAST/EiJ f 0.0 0.0138 0.0272 -0.0272
CAST/EiJ m 0.0 0.0146 0.0287 -0.0287
NOD/ShiLtJ f 0.0 0.0142 0.0279 -0.0279
NOD/ShiLtJ m 0.0 0.015 0.0296 -0.0296
NZO/HlLtJ f 0.0 0.0146 0.0287 -0.0287
NZO/HlLtJ m 0.0588 0.0146 0.0876 0.0301
PWK/PhJ f 0.0 0.0135 0.0265 -0.0265
PWK/PhJ m 0.0 0.0128 0.0253 -0.0253
WSB/EiJ f 0.0 0.0142 0.0279 -0.0279
WSB/EiJ m 0.0 0.015 0.0296 -0.0296


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 0.0106 0.0209 -0.0209
A/J both 0.0 0.0106 0.0209 -0.0209
C57BL/6J both 0.0 0.0106 0.0209 -0.0209
CAST/EiJ both 0.0 0.01 0.0198 -0.0198
NOD/ShiLtJ both 0.0 0.0103 0.0204 -0.0204
NZO/HlLtJ both 0.0294 0.0103 0.0497 0.0091
PWK/PhJ both 0.0 0.0093 0.0183 -0.0183
WSB/EiJ both 0.0 0.0103 0.0204 -0.0204




  GWAS USING LINEAR MIXED MODELS