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Project measure / variable:   Loos2   short_arrest_dur_DK

ID, description, units MPD:54065   short_arrest_dur_DK   cumulative duration of short arrests during dark phase, over 3 days of testing   [s]  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration of short arrests during dark phase, over 3 days of testing



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means4251   s
Median of the strain means4073   s
SD of the strain means± 1347
Coefficient of variation (CV)0.317
Min–max range of strain means1895   –   6549   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 704879045.7776 70487904.5778 55.7772 < 0.0001
Residuals 426 538353550.8119 1263740.7296


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2522.0 931.0   59 121.0 0.369 923.0, 5419.0 -1.28
A/J m 5210.0 1432.0   43 218.0 0.275 2327.0, 8268.0 0.71
BALB/cByJ m 6549.0 1388.0   44 209.0 0.212 3306.0, 9632.0 1.71
C3H/HeJ m 1895.0 475.0   29 88.3 0.251 1123.0, 2959.0 -1.75
C57BL/6J m 4330.0 805.0   107 77.8 0.186 2226.0, 7028.0 0.06
CAST/EiJ m 4073.0 1131.0   14 302.0 0.278 2688.0, 6162.0 -0.13
DBA/2J m 4029.0 1046.0   39 168.0 0.26 2520.0, 6490.0 -0.17
FVB/NJ m 3905.0 1307.0   36 218.0 0.335 1801.0, 7237.0 -0.26
NOD/ShiLtJ m 5617.0 1607.0   37 264.0 0.286 2440.0, 9626.0 1.01
PWK/PhJ m 5130.0 1183.0   15 305.0 0.231 3099.0, 7747.0 0.65
WSB/EiJ m 3506.0 1024.0   14 274.0 0.292 2020.0, 5184.0 -0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2522.2644 146.3535 2809.9292 2234.5996
A/J m 5210.4907 171.4331 5547.4508 4873.5306
BALB/cByJ m 6549.425 169.4738 6882.534 6216.316
C3H/HeJ m 1894.7103 208.7517 2305.0219 1484.3988
C57BL/6J m 4330.4224 108.6769 4544.0321 4116.8128
CAST/EiJ m 4072.75 300.445 4663.2891 3482.2109
DBA/2J m 4029.2231 180.01 4383.0415 3675.4047
FVB/NJ m 3905.3917 187.3604 4273.6575 3537.1258
NOD/ShiLtJ m 5617.0541 184.8111 5980.3093 5253.7988
PWK/PhJ m 5130.22 290.2574 5700.735 4559.705
WSB/EiJ m 3505.5857 300.445 4096.1249 2915.0466




  GWAS USING LINEAR MIXED MODELS