Project measure / variable:   Loos2   activity_mean_dur_LT

ID, description, units MPD:54006   activity_mean_dur_LT   mean duration per activity bout, over 3 days of testing, log10 transformed   [log(s)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - mean duration per activity bout, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.34   log(s)
Median of the strain means1.33   log(s)
SD of the strain means± 0.110
Coefficient of variation (CV)0.0816
Min–max range of strain means1.18   –   1.51   log(s)
Mean sample size per strain33.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 4.0309 0.4031 13.0294 < 0.0001
Residuals 412 12.746 0.0309


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.33 0.172   58 0.0226 0.129 0.872, 1.75 -0.13
A/J m 1.26 0.242   41 0.0379 0.192 0.737, 1.87 -0.77
BALB/cByJ m 1.18 0.154   44 0.0232 0.131 0.918, 1.48 -1.5
C3H/HeJ m 1.42 0.175   29 0.0325 0.123 1.18, 2.19 0.69
C57BL/6J m 1.27 0.128   107 0.0124 0.101 0.957, 1.93 -0.68
CAST/EiJ m 1.3 0.0618   14 0.0165 0.0476 1.18, 1.45 -0.41
DBA/2J m 1.48 0.344   29 0.0639 0.232 1.03, 2.38 1.24
FVB/NJ m 1.51 0.0862   36 0.0144 0.0572 1.32, 1.71 1.51
NOD/ShiLtJ m 1.33 0.106   37 0.0174 0.0796 1.1, 1.54 -0.13
PWK/PhJ m 1.47 0.226   15 0.0584 0.154 1.19, 2.15 1.14
WSB/EiJ m 1.24 0.171   13 0.0474 0.137 1.0, 1.64 -0.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.3347 0.0231 1.3801 1.2893
A/J m 1.2649 0.0275 1.3189 1.2109
BALB/cByJ m 1.1777 0.0265 1.2298 1.1255
C3H/HeJ m 1.4231 0.0327 1.4873 1.3589
C57BL/6J m 1.2698 0.017 1.3032 1.2364
CAST/EiJ m 1.2979 0.047 1.3903 1.2055
DBA/2J m 1.4827 0.0327 1.5469 1.4185
FVB/NJ m 1.5059 0.0293 1.5636 1.4483
NOD/ShiLtJ m 1.3274 0.0289 1.3842 1.2706
PWK/PhJ m 1.4713 0.0454 1.5606 1.3821
WSB/EiJ m 1.2435 0.0488 1.3394 1.1476




  GWAS USING LINEAR MIXED MODELS