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Project measure / variable:   Odet2   sperm_LIN_120

ID, description, units MPD:53898   sperm_LIN_120   sperm mean linearity   [ratio]  at 120 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean linearity at 120 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means25.3   ratio
Median of the strain means25.6   ratio
SD of the strain means± 3.27
Coefficient of variation (CV)0.129
Min–max range of strain means19.3   –   29.4   ratio
Mean sample size per strain12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 876.4405 125.2058 4.8334 0.0001
Residuals 95 2460.8993 25.9042


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 25.7 4.04   17 0.981 0.157 18.0, 32.0 0.11
A/J m 28.7 5.2   14 1.39 0.181 18.0, 37.0 1.03
C57BL/6J m 23.3 5.1   11 1.54 0.219 15.0, 36.0 -0.62
CAST/EiJ m 27.1 4.01   12 1.16 0.148 22.0, 36.0 0.54
NOD/ShiLtJ m 19.3 3.71   10 1.17 0.192 15.0, 26.0 -1.84
NZO/HlLtJ m 25.5 4.09   10 1.29 0.16 21.0, 33.0 0.05
PWK/PhJ m 23.6 7.47   15 1.93 0.317 16.0, 36.0 -0.53
WSB/EiJ m 29.4 5.23   14 1.4 0.178 19.0, 34.0 1.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 25.7059 1.2344 28.1565 23.2553
A/J m 28.7143 1.3603 31.4147 26.0138
C57BL/6J m 23.2727 1.5346 26.3192 20.2262
CAST/EiJ m 27.0833 1.4692 30.0002 24.1665
NOD/ShiLtJ m 19.3 1.6095 22.4952 16.1048
NZO/HlLtJ m 25.5 1.6095 28.6952 22.3048
PWK/PhJ m 23.6 1.3141 26.2089 20.9911
WSB/EiJ m 29.3571 1.3603 32.0576 26.6567




  GWAS USING LINEAR MIXED MODELS