MPD: Data set: Odet2

Odet2: Male reproduction in 8 inbred founder strains of the Collaborative Cross: Sperm motility (2015)

Odet F, Pan W, Bell TA, Goodson SG, Stevans AM, Yun Z, Aylor DL, Kao CY, McMillan L, de Villena FP, O'Brien DA. The Founder Strains of the Collaborative Cross Express a Complex Combination of Advantageous and Deleterious Traits for Male Reproduction. G3 (Bethesda). 2015 Oct 19;5(12):2671-83. doi: 10.1534/g3.115.020172. PubMed 26483008

Odet2 downloads
• Download Odet2 project data set animal data, as uploaded
• Download Odet2 animal data matrix with factor-related expansion applied as necessary
• Download Odet2 strain means, SD, N, etc. one row per strain/sex/measure
• Odet2 supplementary data

Ontology terms mapped to Odet2 measures:

Investigators	Deborah A O'Brien University of North Carolina, Chapel Hill, NC Fanny Odet University of North Carolina, Chapel Hill, NC Wenqi Pan University of North Carolina, Chapel Hill, NC Fernando Pardo-Manuel de Villena University of North Carolina, Chapel Hill, NC
Participants	Bell TA, Goodson SG, Stevans AM, Yun Z, Aylor DL, Kao C-Y, McMillan L
Contact	Deborah A O'Brien dao@med.unc.edu Lab web site
Part of a series:	• Morphology, histology, metabolism see Odet1 • Sperm motility (this project) Odet2
Project type	Phenotype strain survey data set
MPD identifiers	Odet2 MPD:538
Data changelog	No updates/corrections. Initial release date: 04/2016.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Procedures conducted:

• microscopy

Male reproductive sperm motility.

Mice: inbred w/CC8 8 strains ♂ age 10-66wks 1 experimental group

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
Odet2:8	Odet2	microscopy	(none)	percentage of sperm that are motile [%] sperm_motile 53808 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:15	Odet2	microscopy	(none)	percentage of motile sperm that are 'progressive' [%] sperm_prog 53815 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:21	Odet2	microscopy	(none)	percentage of motile sperm that are 'intermediate' [%] sperm_int 53821 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:28	Odet2	microscopy	(none)	percentage of motile sperm that are 'hyperactivated' [%] sperm_hyper 53828 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:35	Odet2	microscopy	(none)	percentage of motile sperm that are 'vigorous' [%] sperm_vigor 53835 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:41	Odet2	microscopy	(none)	percentage of motile sperm that are 'slow' [%] sperm_slow 53841 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:48	Odet2	microscopy	(none)	percentage of motile sperm that are 'weak' [%] sperm_weak 53848 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:55	Odet2	microscopy	(none)	sperm mean path velocity [µm/s] sperm_VAP 53855 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:61	Odet2	microscopy	(none)	sperm mean straight line velocity [µm/s] sperm_VSL 53861 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:68	Odet2	microscopy	(none)	sperm mean curvilinear velocity [µm/s] sperm_VCL 53868 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:75	Odet2	microscopy	(none)	sperm mean lateral head displacement (amplitude) [µm] sperm_ALH 53875 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:81	Odet2	microscopy	(none)	sperm mean cross beat frequency [Hz] sperm_BCF 53881 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:88	Odet2	microscopy	(none)	sperm mean straightness [ratio] sperm_STR 53888 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13

Odet2:94	Odet2	microscopy	(none)	sperm mean linearity [ratio] sperm_LIN 53894 min: 10 30 60 90 120	inbred w/CC8	8	m	10-66wks	N=13