Project measure / variable:   Odet2   sperm_VSL_10

ID, description, units MPD:53861   sperm_VSL_10   sperm mean straight line velocity   [µm/s]  at 10 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - sperm mean straight line velocity at 10 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means99.9   µm/s
Median of the strain means95.3   µm/s
SD of the strain means± 30.9
Coefficient of variation (CV)0.310
Min–max range of strain means67.3   –   151   µm/s
Mean sample size per strain14.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 101049.9414 14435.7059 22.129 < 0.0001
Residuals 108 70453.1879 652.3443


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 79.7 20.7   17 5.01 0.259 39.5, 119.0 -0.65
A/J m 98.8 33.1   17 8.03 0.335 34.6, 144.0 -0.03
C57BL/6J m 67.3 15.2   11 4.57 0.226 39.2, 88.6 -1.05
CAST/EiJ m 70.3 12.2   12 3.52 0.174 54.2, 94.2 -0.96
NOD/ShiLtJ m 96.8 25.5   10 8.07 0.264 48.4, 134.0 -0.1
NZO/HlLtJ m 93.9 19.9   16 4.97 0.212 51.2, 120.0 -0.19
PWK/PhJ m 141.0 11.8   15 3.06 0.084 118.0, 158.0 1.33
WSB/EiJ m 151.0 40.9   18 9.64 0.271 26.0, 211.0 1.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 79.6941 6.1946 91.9729 67.4153
A/J m 98.7529 6.1946 111.0317 86.4741
C57BL/6J m 67.2636 7.7009 82.5282 51.9991
CAST/EiJ m 70.325 7.3731 84.9397 55.7103
NOD/ShiLtJ m 96.82 8.0768 112.8296 80.8104
NZO/HlLtJ m 93.9063 6.3853 106.5629 81.2496
PWK/PhJ m 140.8333 6.5947 153.9051 127.7616
WSB/EiJ m 151.0056 6.0201 162.9384 139.0727




  GWAS USING LINEAR MIXED MODELS