Project measure / variable:   Odet2   sperm_vigor_120

ID, description, units MPD:53839   sperm_vigor_120   percentage of motile sperm that are 'vigorous'   [%]  at 120 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'vigorous' at 120 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means31.2   %
Median of the strain means31.2   %
SD of the strain means± 16.1
Coefficient of variation (CV)0.514
Min–max range of strain means10.5   –   59.1   %
Mean sample size per strain12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 23682.8203 3383.26 31.9885 < 0.0001
Residuals 95 10047.6597 105.7648


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 21.3 7.2   17 1.75 0.339 6.3, 33.2 -0.62
A/J m 30.3 9.79   14 2.62 0.324 12.8, 46.6 -0.06
C57BL/6J m 14.1 9.48   11 2.86 0.673 -1.07
CAST/EiJ m 10.5 4.99   12 1.44 0.474 4.7, 23.8 -1.29
NOD/ShiLtJ m 32.1 13.1   10 4.15 0.409 9.5, 47.1 0.05
NZO/HlLtJ m 39.7 9.63   10 3.05 0.242 19.1, 53.2 0.53
PWK/PhJ m 42.8 14.6   15 3.76 0.341 16.6, 67.7 0.72
WSB/EiJ m 59.1 10.5   14 2.81 0.178 39.8, 74.3 1.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 21.2706 2.4943 26.2224 16.3188
A/J m 30.2643 2.7486 35.7209 24.8077
C57BL/6J m 14.1 3.1008 20.2559 7.9441
CAST/EiJ m 10.5333 2.9688 16.4271 4.6395
NOD/ShiLtJ m 32.11 3.2522 38.5663 25.6537
NZO/HlLtJ m 39.74 3.2522 46.1963 33.2837
PWK/PhJ m 42.78 2.6554 48.0516 37.5084
WSB/EiJ m 59.1286 2.7486 64.5852 53.672




  GWAS USING LINEAR MIXED MODELS