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Project measure / variable:   Odet2   sperm_hyper_30

ID, description, units MPD:53829   sperm_hyper_30   percentage of motile sperm that are 'hyperactivated'   [%]  at 30 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'hyperactivated' at 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means5.70   %
Median of the strain means5.13   %
SD of the strain means± 2.23
Coefficient of variation (CV)0.391
Min–max range of strain means3.17   –   9.31   %
Mean sample size per strain13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 478.2976 68.3282 3.7115 0.0013
Residuals 97 1785.7744 18.41


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 6.05 5.01   15 1.29 0.828 0.16
A/J m 3.17 1.63   16 0.407 0.514 0.7, 5.6 -1.14
C57BL/6J m 7.79 7.14   11 2.15 0.917 0.6, 23.7 0.94
CAST/EiJ m 3.98 2.78   12 0.802 0.699 1.1, 9.8 -0.77
NOD/ShiLtJ m 7.23 5.76   10 1.82 0.796 1.0, 19.6 0.69
NZO/HlLtJ m 3.86 2.09   12 0.603 0.541 0.9, 8.0 -0.83
PWK/PhJ m 9.31 5.16   15 1.33 0.554 2.4, 19.7 1.62
WSB/EiJ m 4.22 2.51   14 0.671 0.595 1.6, 10.7 -0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 6.0467 1.1079 8.2454 3.8479
A/J m 3.1687 1.0727 5.2977 1.0398
C57BL/6J m 7.7909 1.2937 10.3585 5.2233
CAST/EiJ m 3.975 1.2386 6.4333 1.5167
NOD/ShiLtJ m 7.23 1.3568 9.9229 4.5371
NZO/HlLtJ m 3.8583 1.2386 6.3166 1.4
PWK/PhJ m 9.3133 1.1079 11.5121 7.1146
WSB/EiJ m 4.2214 1.1467 6.4974 1.9455




  GWAS USING LINEAR MIXED MODELS