Project measure / variable:   Odet2   sperm_hyper_10

ID, description, units MPD:53828   sperm_hyper_10   percentage of motile sperm that are 'hyperactivated'   [%]  at 10 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'hyperactivated' at 10 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.93   %
Median of the strain means3.52   %
SD of the strain means± 1.71
Coefficient of variation (CV)0.434
Min–max range of strain means1.81   –   6.30   %
Mean sample size per strain14.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 273.2748 39.0393 6.1193 < 0.0001
Residuals 108 689.0035 6.3797


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 3.58 2.72   17 0.659 0.76 0.4, 9.8 -0.21
A/J m 3.46 2.43   17 0.59 0.703 0.7, 9.0 -0.28
C57BL/6J m 1.81 0.718   11 0.216 0.397 0.4, 2.6 -1.24
CAST/EiJ m 5.56 2.85   12 0.822 0.512 0.8, 10.0 0.95
NOD/ShiLtJ m 5.71 4.32   10 1.36 0.756 1.04
NZO/HlLtJ m 2.8 1.63   16 0.408 0.584 -0.66
PWK/PhJ m 6.3 3.19   15 0.823 0.506 0.6, 13.8 1.39
WSB/EiJ m 2.24 1.37   18 0.323 0.61 -0.99


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 3.5765 0.6126 4.7907 2.3622
A/J m 3.4588 0.6126 4.6731 2.2446
C57BL/6J m 1.8091 0.7616 3.3186 0.2996
CAST/EiJ m 5.5583 0.7291 7.0036 4.1131
NOD/ShiLtJ m 5.71 0.7987 7.2932 4.1268
NZO/HlLtJ m 2.8 0.6314 4.0516 1.5484
PWK/PhJ m 6.3 0.6522 7.5927 5.0073
WSB/EiJ m 2.2444 0.5953 3.4245 1.0644




  GWAS USING LINEAR MIXED MODELS