Project measure / variable:   Odet2   sperm_int_120

ID, description, units MPD:53825   sperm_int_120   percentage of motile sperm that are 'intermediate'   [%]  at 120 min  
Data set, strains Odet2   inbred w/CC8   8 strains     sex: m     age: 10-66wks
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  STRAIN COMPARISON PLOT
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Odet2 - percentage of motile sperm that are 'intermediate' at 120 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.09   %
Median of the strain means2.24   %
SD of the strain means± 3.46
Coefficient of variation (CV)1.12
Min–max range of strain means0.318   –   11.1   %
Mean sample size per strain12.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1115.1579 159.3083 14.9381 < 0.0001
Residuals 95 1013.1304 10.6645


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.39 1.69   17 0.409 0.706 -0.2
A/J m 2.09 1.41   14 0.376 0.672 -0.29
C57BL/6J m 0.318 0.569   11 0.172 1.79 -0.8
CAST/EiJ m 0.475 0.805   12 0.232 1.69 -0.76
NOD/ShiLtJ m 1.32 1.24   10 0.391 0.937 -0.51
NZO/HlLtJ m 3.15 1.17   10 0.369 0.37 1.5, 5.1 0.02
PWK/PhJ m 3.89 3.6   15 0.931 0.926 0.5, 12.2 0.23
WSB/EiJ m 11.1 7.46   14 1.99 0.675 3.4, 23.4 2.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.3882 0.792 3.9606 0.8158
A/J m 2.0929 0.8728 3.8256 0.3602
C57BL/6J m 0.3182 0.9846 2.2729 0.0
CAST/EiJ m 0.475 0.9427 2.3465 0.0
NOD/ShiLtJ m 1.32 1.0327 3.3702 0.0
NZO/HlLtJ m 3.15 1.0327 5.2002 1.0998
PWK/PhJ m 3.8933 0.8432 5.5673 2.2194
WSB/EiJ m 11.0571 0.8728 12.7898 9.3244




  GWAS USING LINEAR MIXED MODELS