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Project measure / variable:   Rusyn6   Acox1_liver_tce

ID, description, units MPD:51226   Acox1_liver_tce   Acox1, mRNA in liver, relative to control group   [ratio]  
trichloroethylene study
Data set, strains Rusyn6   inbred   7 strains     sex: m     age: 6-7wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn6 - Acox1, mRNA in liver, relative to control group



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested7 strains
Mean of the strain means2.93   ratio
Median of the strain means3.17   ratio
SD of the strain means± 1.21
Coefficient of variation (CV)0.412
Min–max range of strain means0.633   –   4.47   ratio
Mean sample size per strain2.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 6 25.8962 4.316 9.9601 0.0003
Residuals 13 5.6333 0.4333


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.4 0.0   2   0.0 0.0 2.4, 2.4 -0.44
A/J m 3.17 0.802   3 0.463 0.253 2.4, 4.0 0.2
BTBR T+ Itpr3tf/J m 3.57 0.709   3 0.41 0.199 2.8, 4.2 0.53
C57BL/6J m 2.77 0.379   3 0.219 0.137 2.5, 3.2 -0.13
CAST/EiJ m 0.633 0.115   3 0.0667 0.182 0.5, 0.7 -1.9
NOD/ShiLtJ m 4.47 1.2   3 0.694 0.269 3.3, 5.7 1.28
NZW/LacJ m 3.5 0.265   3 0.153 0.0756 3.2, 3.7 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.4 0.4655 3.4056 1.3944
A/J m 3.1667 0.3801 3.9877 2.3456
BTBR T+ Itpr3tf/J m 3.5667 0.3801 4.3877 2.7456
C57BL/6J m 2.7667 0.3801 3.5877 1.9456
CAST/EiJ m 0.6333 0.3801 1.4544 0.0
NOD/ShiLtJ m 4.4667 0.3801 5.2877 3.6456
NZW/LacJ m 3.5 0.3801 4.3211 2.6789




  GWAS USING LINEAR MIXED MODELS