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Project measure / variable:   Harrill1   bw_d4_trt

ID, description, units MPD:39504   bw_d4_trt   body weight day 4   [g]  isoniazid  
isoniazid study
Data set, strains Harrill1   inbred   33 strains     sex: f     age: 8-10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Harrill1 - body weight day 4 isoniazid



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested33 strains
Mean of the strain means18.9   g
Median of the strain means18.2   g
SD of the strain means± 4.83
Coefficient of variation (CV)0.256
Min–max range of strain means8.90   –   31.7   g
Mean sample size per strain3.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 2303.713 74.3133 32.6091 < 0.0001
Residuals 83 189.15 2.2789


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.2 2.08   4 1.04 0.121 14.3, 19.1 -0.34
A/J f 18.8 0.778   2   0.55 0.0415 18.2, 19.3 -0.01
AKR/J f 22.0 1.93   4 0.963 0.0874 20.0, 24.6 0.65
BALB/cJ f 18.1 0.591   4 0.295 0.0326 17.5, 18.9 -0.16
BTBR T+ Itpr3tf/J f 23.9 1.65   4 0.826 0.0693 22.2, 26.0 1.04
BUB/BnJ f 21.3 1.39   4 0.694 0.0651 19.3, 22.4 0.51
C3H/HeJ f 18.0 2.05   4 1.02 0.114 15.4, 20.3 -0.18
C57BL/6J f 18.2 0.988   4 0.494 0.0544 17.0, 19.4 -0.14
C57BLKS/J f 18.2 0.572   4 0.286 0.0314 17.7, 19.0 -0.14
C57BR/cdJ f 17.2 1.54   4 0.769 0.0892 15.5, 18.8 -0.34
C58/J f 14.7 0.695   4 0.347 0.0472 14.1, 15.7 -0.86
CBA/J f 20.6 1.41   4 0.703 0.0683 19.2, 22.5 0.36
CE/J f 19.2 1.52   4 0.759 0.0791 17.3, 20.9 0.07
DBA/2J f 17.0 1.23   4 0.615 0.0724 15.4, 18.3 -0.38
FVB/NJ f 18.2 2.15   4 1.07 0.118 15.6, 20.8 -0.14
I/LnJ f 16.9 2.04   4 1.02 0.12 14.8, 19.0 -0.41
KK/HlJ f 25.3 1.51   4 0.754 0.0597 23.6, 26.6 1.33
LG/J f 31.7 0.854   3 0.493 0.027 30.8, 32.5 2.66
LP/J f 16.0 2.03   3 1.17 0.127 13.7, 17.6 -0.59
MA/MyJ f 18.2 2.47   2   1.75 0.136 16.5, 20.0 -0.14
MRL/MpJ f 31.4 2.33   4 1.17 0.0742 29.2, 34.6 2.6
NOD/ShiLtJ f 19.4 1.18   4 0.589 0.0608 18.2, 21.0 0.11
NON/ShiLtJ f 19.7 1.36   3 0.784 0.0688 18.9, 21.3 0.17
NOR/LtJ f 19.8 1.63   4 0.814 0.0823 17.5, 21.0 0.2
NZW/LacJ f 26.3 1.33   4 0.665 0.0505 24.6, 27.6 1.54
PL/J f 16.1 0.723   3 0.418 0.0448 15.3, 16.6 -0.57
PWK/PhJ f 10.4 0.981   4 0.491 0.0946 9.1, 11.4 -1.75
RIIIS/J f 14.4 1.82   3 1.05 0.127 12.3, 15.6 -0.92
SEA/GnJ f 18.4 0.707   2   0.5 0.0384 17.9, 18.9 -0.09
SJL/J f 17.6 1.51   4 0.756 0.0859 16.1, 19.0 -0.26
SM/J f 13.2 0.99   2   0.7 0.075 12.5, 13.9 -1.17
SWR/J f 16.0 0.748   4 0.374 0.0468 15.2, 17.0 -0.59
WSB/EiJ f 8.9 0.0   1   0.0 0.0 8.9, 8.9 -2.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 17.2 0.7548 18.7013 15.6987
A/J f 18.75 1.0675 20.8731 16.6269
AKR/J f 22.025 0.7548 23.5263 20.5237
BALB/cJ f 18.125 0.7548 19.6263 16.6237
BTBR T+ Itpr3tf/J f 23.85 0.7548 25.3513 22.3487
BUB/BnJ f 21.325 0.7548 22.8263 19.8237
C3H/HeJ f 17.975 0.7548 19.4763 16.4737
C57BL/6J f 18.175 0.7548 19.6763 16.6737
C57BLKS/J f 18.2 0.7548 19.7013 16.6987
C57BR/cdJ f 17.225 0.7548 18.7263 15.7237
C58/J f 14.725 0.7548 16.2263 13.2237
CBA/J f 20.575 0.7548 22.0763 19.0737
CE/J f 19.175 0.7548 20.6763 17.6737
DBA/2J f 17.0 0.7548 18.5013 15.4987
FVB/NJ f 18.25 0.7548 19.7513 16.7487
I/LnJ f 16.925 0.7548 18.4263 15.4237
KK/HlJ f 25.275 0.7548 26.7763 23.7737
LG/J f 31.7 0.8716 33.4335 29.9665
LP/J f 15.9667 0.8716 17.7002 14.2331
MA/MyJ f 18.25 1.0675 20.3731 16.1269
MRL/MpJ f 31.425 0.7548 32.9263 29.9237
NOD/ShiLtJ f 19.375 0.7548 20.8763 17.8737
NON/ShiLtJ f 19.7333 0.8716 21.4669 17.9998
NOR/LtJ f 19.775 0.7548 21.2763 18.2737
NZW/LacJ f 26.325 0.7548 27.8263 24.8237
PL/J f 16.1333 0.8716 17.8669 14.3998
PWK/PhJ f 10.375 0.7548 11.8763 8.8737
RIIIS/J f 14.4 0.8716 16.1335 12.6665
SEA/GnJ f 18.4 1.0675 20.5231 16.2769
SJL/J f 17.6 0.7548 19.1013 16.0987
SM/J f 13.2 1.0675 15.3231 11.0769
SWR/J f 16.0 0.7548 17.5013 14.4987




  GWAS USING LINEAR MIXED MODELS