Project measure / variable:   Wiltshire2   TST_cont

ID, description, units MPD:38001   TST_cont   TST duration of immobility   [%]  control  
fluoxetine study
Data set, strains Wiltshire2   inbred   30 strains     sex: m     age: 9-10wks
Procedure tail suspension test
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  STRAIN COMPARISON PLOT
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Wiltshire2 - TST duration of immobility control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested30 strains
Mean of the strain means30.3   %
Median of the strain means29.8   %
SD of the strain means± 15.7
Coefficient of variation (CV)0.518
Min–max range of strain means4.36   –   63.7   %
Mean sample size per strain9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 62728.1157 2163.0385 14.6761 < 0.0001
Residuals 266 39204.5679 147.3856


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 34.0 12.3   14 3.3 0.363 10.8, 53.1 0.23
A/J m 29.7 10.7   11 3.24 0.362 17.2, 53.9 -0.04
AKR/J m 53.5 8.08   8 2.86 0.151 41.9, 64.7 1.47
BALB/cJ m 29.8 11.8   16 2.95 0.397 17.6, 54.1 -0.03
BTBR T+ Itpr3tf/J m 4.36 6.92   8 2.45 1.59 -1.65
BUB/BnJ m 39.5 7.98   8 2.82 0.202 31.1, 54.7 0.58
C3H/HeJ m 27.0 9.13   14 2.44 0.338 9.22, 43.8 -0.21
C57BL/6J m 48.8 13.7   7 5.18 0.281 25.2, 66.9 1.17
C57BLKS/J m 28.1 11.9   10 3.78 0.425 12.3, 50.9 -0.14
C57BR/cdJ m 27.1 18.1   11 5.45 0.667 1.0, 52.6 -0.21
C58/J m 22.5 10.9   9 3.64 0.486 9.8, 39.7 -0.5
CBA/J m 37.5 9.12   14 2.44 0.243 20.3, 51.9 0.46
CE/J m 30.2 13.7   9 4.57 0.454 16.3, 58.8 -0.01
DBA/2J m 12.3 11.4   17 2.78 0.929 0.2, 34.7 -1.15
FVB/NJ m 14.8 10.7   8 3.78 0.724 -0.99
I/LnJ m 22.0 23.8   9 7.94 1.08 -0.53
LG/J m 7.58 11.2   9 3.72 1.47 0.2, 34.4 -1.45
LP/J m 54.6 9.15   6 3.73 0.167 43.5, 69.9 1.54
MA/MyJ m 22.0 15.0   9 5.01 0.684 4.7, 50.2 -0.53
MRL/MpJ m 4.45 4.29   9 1.43 0.965 0.5, 13.2 -1.65
NOD/ShiLtJ m 45.9 7.59   10 2.4 0.165 32.3, 57.0 0.99
NOR/LtJ m 29.1 7.25   7 2.74 0.249 18.8, 38.3 -0.08
NZB/BlNJ m 44.8 24.4   8 8.61 0.544 5.2, 71.6 0.92
NZW/LacJ m 34.6 15.5   8 5.48 0.448 13.7, 53.4 0.27
P/J m 36.2 13.7   8 4.86 0.379 16.6, 56.2 0.37
PL/J m 47.2 11.4   12 3.3 0.242 21.6, 63.5 1.07
RIIIS/J m 5.16 3.86   9 1.29 0.747 1.5, 13.4 -1.6
SJL/J m 39.9 10.9   9 3.64 0.274 21.0, 53.4 0.61
SM/J m 63.7 4.68   7 1.77 0.0734 58.6, 71.4 2.12
SWR/J m 14.0 9.53   12 2.75 0.682 0.11, 34.4 -1.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 34.0286 3.2446 40.417 27.6402
A/J m 29.6909 3.6604 36.898 22.4838
AKR/J m 53.5 4.2922 61.9511 45.0489
BALB/cJ m 29.7813 3.0351 35.7571 23.8054
BTBR T+ Itpr3tf/J m 4.3575 4.2922 12.8086 0.0
BUB/BnJ m 39.5375 4.2922 47.9886 31.0864
C3H/HeJ m 27.0371 3.2446 33.4255 20.6487
C57BL/6J m 48.8 4.5886 57.8346 39.7654
C57BLKS/J m 28.14 3.8391 35.6989 20.5811
C57BR/cdJ m 27.0882 3.6604 34.2953 19.8811
C58/J m 22.4778 4.0467 30.4455 14.51
CBA/J m 37.4929 3.2446 43.8813 31.1045
CE/J m 30.2222 4.0467 38.19 22.2545
DBA/2J m 12.3182 2.9444 18.1156 6.5209
FVB/NJ m 14.79 4.2922 23.2411 6.3389
I/LnJ m 21.9911 4.0467 29.9588 14.0234
LG/J m 7.5756 4.0467 15.5433 0.0
LP/J m 54.6333 4.9562 64.3918 44.8749
MA/MyJ m 21.9667 4.0467 29.9344 13.9989
MRL/MpJ m 4.4478 4.0467 12.4155 0.0
NOD/ShiLtJ m 45.95 3.8391 53.5089 38.3911
NOR/LtJ m 29.1429 4.5886 38.1774 20.1083
NZB/BlNJ m 44.7875 4.2922 53.2386 36.3364
NZW/LacJ m 34.625 4.2922 43.0761 26.1739
P/J m 36.2125 4.2922 44.6636 27.7614
PL/J m 47.225 3.5046 54.1253 40.3247
RIIIS/J m 5.1633 4.0467 13.1311 0.0
SJL/J m 39.9 4.0467 47.8677 31.9323
SM/J m 63.7429 4.5886 72.7774 54.7083
SWR/J m 13.97 3.5046 20.8703 7.0697




  GWAS USING LINEAR MIXED MODELS