Project measure / variable:   Nadeau1   bw_change

ID, description, units MPD:28303   bw_change   body weight   [g]  fold change  
high-fat diet study
Data set, strains Nadeau1   B6.A consomic w/par   24 strains     sex: m     age: 5wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Nadeau1 - body weight fold change



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means1.54   g
Median of the strain means1.53   g
SD of the strain means± 0.151
Coefficient of variation (CV)0.0980
Min–max range of strain means1.29   –   1.82   g
Mean sample size per strain17.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 9.011 0.3918 11.838 < 0.0001
Residuals 398 13.172 0.0331


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 1.39 0.128   25 0.0256 0.092 1.11, 1.64 -1.0
B6.A-Chr1 m 1.82 0.172   17 0.0417 0.0948 1.38, 2.1 1.85
B6.A-Chr10 m 1.45 0.263   13 0.0729 0.182 1.15, 1.98 -0.6
B6.A-Chr11 m 1.48 0.179   14 0.0478 0.12 1.31, 1.96 -0.4
B6.A-Chr12 m 1.47 0.292   13 0.0809 0.198 0.72, 1.85 -0.47
B6.A-Chr13 m 1.59 0.255   20 0.0571 0.161 1.25, 2.3 0.33
B6.A-Chr14 m 1.57 0.114   17 0.0275 0.0722 1.39, 1.79 0.2
B6.A-Chr15 m 1.52 0.17   21 0.037 0.112 1.27, 1.89 -0.14
B6.A-Chr16 m 1.54 0.178   20 0.0397 0.116 1.26, 1.85 0.0
B6.A-Chr17 m 1.43 0.112   20 0.0251 0.0785 1.25, 1.65 -0.73
B6.A-Chr18 m 1.63 0.162   11 0.0488 0.0994 1.27, 1.81 0.59
B6.A-Chr19 m 1.76 0.217   18 0.0511 0.123 1.4, 2.21 1.45
B6.A-Chr2 m 1.66 0.131   12 0.0379 0.0793 1.46, 1.86 0.79
B6.A-Chr3 m 1.33 0.149   16 0.0371 0.111 1.14, 1.6 -1.39
B6.A-Chr4 m 1.34 0.127   20 0.0284 0.0947 1.08, 1.57 -1.33
B6.A-Chr5 m 1.71 0.367   20 0.0821 0.215 1.13, 2.54 1.12
B6.A-Chr6 m 1.42 0.139   14 0.0371 0.0975 1.23, 1.67 -0.8
B6.A-Chr7 m 1.29 0.0736   18 0.0173 0.057 1.16, 1.42 -1.66
B6.A-Chr8 m 1.46 0.117   20 0.0262 0.0801 1.31, 1.7 -0.53
B6.A-Chr9 m 1.63 0.191   17 0.0464 0.118 1.21, 1.95 0.59
B6.A-ChrX m 1.79 0.198   16 0.0495 0.111 1.39, 2.25 1.65
B6.A-ChrY m 1.41 0.0868   17 0.0211 0.0615 1.28, 1.56 -0.86
B6.A-mt m 1.55 0.123   23 0.0256 0.0793 1.34, 1.76 0.06
C57BL/6J m 1.73 0.162   20 0.0363 0.0939 1.36, 1.97 1.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1.394 0.0364 1.4655 1.3225
B6.A-Chr1 m 1.8153 0.0441 1.902 1.7286
B6.A-Chr10 m 1.4462 0.0505 1.5453 1.347
B6.A-Chr11 m 1.4843 0.0486 1.5799 1.3887
B6.A-Chr12 m 1.4708 0.0505 1.57 1.3716
B6.A-Chr13 m 1.5855 0.0407 1.6655 1.5055
B6.A-Chr14 m 1.5718 0.0441 1.6585 1.485
B6.A-Chr15 m 1.5152 0.0397 1.5933 1.4372
B6.A-Chr16 m 1.5355 0.0407 1.6155 1.4555
B6.A-Chr17 m 1.43 0.0407 1.51 1.35
B6.A-Chr18 m 1.6264 0.0549 1.7342 1.5185
B6.A-Chr19 m 1.7594 0.0429 1.8437 1.6751
B6.A-Chr2 m 1.6575 0.0525 1.7607 1.5543
B6.A-Chr3 m 1.3344 0.0455 1.4238 1.245
B6.A-Chr4 m 1.342 0.0407 1.422 1.262
B6.A-Chr5 m 1.706 0.0407 1.786 1.626
B6.A-Chr6 m 1.4236 0.0486 1.5192 1.328
B6.A-Chr7 m 1.2922 0.0429 1.3765 1.2079
B6.A-Chr8 m 1.4625 0.0407 1.5425 1.3825
B6.A-Chr9 m 1.6265 0.0441 1.7132 1.5397
B6.A-ChrX m 1.79 0.0455 1.8794 1.7006
B6.A-ChrY m 1.4112 0.0441 1.4979 1.3244
B6.A-mt m 1.5491 0.0379 1.6237 1.4746
C57BL/6J m 1.728 0.0407 1.808 1.648




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA