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Project measure / variable:   Ackert1   BMI_M06

ID, description, units MPD:25031   BMI_M06   body mass index (BMI)   [kg/m2]  at age 6mo  
Data set, strains Ackert1   inbred   32 strains     sex: both     age: 26wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Ackert1 - body mass index (BMI) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested31 strains30 strains
Mean of the strain means3.34   kg/m2 3.79   kg/m2
Median of the strain means3.31   kg/m2 3.83   kg/m2
SD of the strain means± 0.478 ± 0.480
Coefficient of variation (CV)0.143 0.126
Min–max range of strain means2.24   –   4.49   kg/m2 2.55   –   4.76   kg/m2
Mean sample size per strain7.0   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 20.2124 20.2124 263.8202 < 0.0001
strain 30 70.5922 2.3531 30.7132 < 0.0001
sex:strain 30 7.0611 0.2354 3.0721 < 0.0001
Residuals 344 26.3553 0.0766


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.92 0.218   8 0.0772 0.0749 2.66, 3.38 -0.87
129S1/SvImJ m 3.42 0.139   7 0.0525 0.0406 3.3, 3.7 -0.78
A/J f 3.54 0.378   8 0.134 0.107 2.86, 3.94 0.43
A/J m 3.69 0.343   8 0.121 0.0928 3.3, 4.25 -0.22
AKR/J f 4.49 0.449   6 0.183 0.1 3.89, 4.85 2.42
AKR/J m 4.76 0.0965   5 0.0432 0.0203 4.64, 4.86 2.01
BALB/cByJ f 3.14 0.251   6 0.102 0.0798 2.74, 3.42 -0.41
BALB/cByJ m 3.81 0.0705   6 0.0288 0.0185 3.7, 3.86 0.03
BTBR T+ Itpr3tf/J f 4.03 0.355   5 0.159 0.088 3.72, 4.58 1.45
BTBR T+ Itpr3tf/J m 4.15 0.32   7 0.121 0.077 3.76, 4.71 0.74
BUB/BnJ f 3.4 0.223   8 0.0787 0.0654 3.12, 3.79 0.14
BUB/BnJ m 4.13 0.319   4 0.159 0.0772 3.89, 4.6 0.7
C3H/HeJ f 2.89 0.0623   8 0.022 0.0215 2.8, 2.96 -0.93
C3H/HeJ m 3.8 0.276   6 0.113 0.0726 3.32, 4.1 0.01
C57BL/10J f 3.43 0.21   8 0.0741 0.061 3.22, 3.89 0.2
C57BL/10J m 3.79 0.198   6 0.081 0.0524 3.46, 4.08 -0.01
C57BL/6J f 3.4 0.188   8 0.0664 0.0553 3.13, 3.62 0.14
C57BL/6J m 3.95 0.249   8 0.0881 0.0631 3.79, 4.55 0.32
C57BLKS/J f 3.31 0.118   8 0.0417 0.0356 3.1, 3.45 -0.05
C57BLKS/J m 3.8 0.156   8 0.0552 0.0411 3.64, 4.11 0.01
C57BR/cdJ f 3.03 0.115   7 0.0436 0.0381 2.84, 3.18 -0.64
C57BR/cdJ m 3.51 0.741   6 0.303 0.211 2.02, 4.0 -0.59
C57L/J f 3.23 0.103   7 0.039 0.032 3.08, 3.41 -0.22
C57L/J m 4.52 0.474   5 0.212 0.105 4.17, 5.31 1.51
CAST/EiJ f 2.66 0.169   6 0.0692 0.0637 2.45, 2.84 -1.41
CAST/EiJ m 2.86 0.165   7 0.0624 0.0578 2.67, 3.18 -1.95
CBA/J f 3.86 0.285   8 0.101 0.0739 3.4, 4.2 1.1
CBA/J m 4.57 0.309   4 0.155 0.0676 4.31, 4.94 1.61
DBA/2J f 3.76 0.23   5 0.103 0.0611 3.51, 4.01 0.89
DBA/2J m 3.54 0.268   7 0.101 0.0755 3.29, 4.09 -0.53
FVB/NJ f 3.54 0.347   8 0.123 0.0979 2.74, 3.82 0.43
FVB/NJ m 3.86 0.339   6 0.138 0.0877 3.35, 4.25 0.14
KK/HlJ f 3.23 0.442   4 0.221 0.137 2.95, 3.89 -0.22
KK/HlJ m 3.9 0.509   7 0.192 0.131 3.23, 4.69 0.22
LP/J f 3.01 0.138   6 0.0564 0.0458 2.85, 3.21 -0.68
LP/J m 3.52 0.0773   8 0.0273 0.022 3.34, 3.58 -0.57
MOLF/EiJ f 2.56 0.129   7 0.0486 0.0502 2.42, 2.81 -1.62
MOLF/EiJ m 3.03 0.383   7 0.145 0.127 2.69, 3.72 -1.59
MRL/MpJ f 4.02 0.123   3 0.0713 0.0307 3.88, 4.12 1.43
MRL/MpJ m 4.16 0.119   7 0.045 0.0286 4.02, 4.33 0.76
NOD.B10Sn-H2b/J f 3.41 0.212   8 0.0749 0.062 3.04, 3.67 0.16
NON/ShiLtJ f 3.85 0.188   8 0.0666 0.049 3.54, 4.05 1.08
NON/ShiLtJ m 4.1 0.38   7 0.143 0.0925 3.55, 4.77 0.64
NZW/LacJ f 3.9 0.129   8 0.0456 0.0331 3.78, 4.14 1.18
NZW/LacJ m 4.3 0.529   5 0.237 0.123 3.9, 5.18 1.05
P/J f 2.75 0.155   6 0.0634 0.0564 2.59, 3.02 -1.23
P/J m 3.29 0.532   6 0.217 0.162 2.37, 3.92 -1.05
PL/J f 3.3 0.271   8 0.0957 0.0822 3.06, 3.88 -0.07
PL/J m 4.0 0.167   8 0.0592 0.0419 3.82, 4.28 0.43
PWD/PhJ f 2.24 0.131   5 0.0584 0.0583 2.08, 2.44 -2.29
PWD/PhJ m 2.55 0.0964   4 0.0482 0.0378 2.45, 2.68 -2.59
RIIIS/J f 3.07 0.213   8 0.0754 0.0694 2.78, 3.35 -0.56
RIIIS/J m 3.87 0.241   6 0.0985 0.0623 3.55, 4.22 0.16
SJL/J f 3.46 0.233   8 0.0825 0.0675 3.1, 3.87 0.26
SJL/J m 3.84 0.195   6 0.0797 0.0509 3.61, 4.1 0.09
SM/J f 3.56 0.175   8 0.0619 0.0491 3.26, 3.84 0.47
SM/J m 3.96 0.209   8 0.0738 0.0527 3.72, 4.18 0.34
SWR/J f 3.26 0.238   6 0.0971 0.073 2.92, 3.51 -0.16
SWR/J m 3.76 0.297   6 0.121 0.079 3.44, 4.23 -0.07
WSB/EiJ f 3.14 0.381   6 0.156 0.121 2.84, 3.88 -0.41
WSB/EiJ m 3.41 0.324   6 0.132 0.0949 3.02, 3.83 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.9162 0.0979 3.1087 2.7238
129S1/SvImJ m 3.4186 0.1046 3.6243 3.2128
A/J f 3.5425 0.0979 3.735 3.35
A/J m 3.6912 0.0979 3.8837 3.4988
AKR/J f 4.4867 0.113 4.7089 4.2644
AKR/J m 4.762 0.1238 5.0055 4.5185
BALB/cByJ f 3.1417 0.113 3.3639 2.9194
BALB/cByJ m 3.8083 0.113 4.0306 3.5861
BTBR T+ Itpr3tf/J f 4.034 0.1238 4.2775 3.7905
BTBR T+ Itpr3tf/J m 4.1529 0.1046 4.3586 3.9471
BUB/BnJ f 3.4037 0.0979 3.5962 3.2113
BUB/BnJ m 4.13 0.1384 4.4022 3.8578
C3H/HeJ f 2.8937 0.0979 3.0862 2.7013
C3H/HeJ m 3.8033 0.113 4.0256 3.5811
C57BL/10J f 3.4337 0.0979 3.6262 3.2413
C57BL/10J m 3.7867 0.113 4.0089 3.5644
C57BL/6J f 3.3975 0.0979 3.59 3.205
C57BL/6J m 3.95 0.0979 4.1425 3.7575
C57BLKS/J f 3.3137 0.0979 3.5062 3.1213
C57BLKS/J m 3.7962 0.0979 3.9887 3.6038
C57BR/cdJ f 3.0271 0.1046 3.2329 2.8214
C57BR/cdJ m 3.51 0.113 3.7323 3.2877
C57L/J f 3.2271 0.1046 3.4329 3.0214
C57L/J m 4.516 0.1238 4.7595 4.2725
CAST/EiJ f 2.66 0.113 2.8823 2.4377
CAST/EiJ m 2.8586 0.1046 3.0643 2.6528
CBA/J f 3.8587 0.0979 4.0512 3.6663
CBA/J m 4.57 0.1384 4.8422 4.2978
DBA/2J f 3.762 0.1238 4.0055 3.5185
DBA/2J m 3.5443 0.1046 3.7501 3.3385
FVB/NJ f 3.54 0.0979 3.7325 3.3475
FVB/NJ m 3.8617 0.113 4.0839 3.6394
KK/HlJ f 3.23 0.1384 3.5022 2.9578
KK/HlJ m 3.9 0.1046 4.1058 3.6942
LP/J f 3.0133 0.113 3.2356 2.7911
LP/J m 3.5162 0.0979 3.7087 3.3238
MOLF/EiJ f 2.5586 0.1046 2.7643 2.3528
MOLF/EiJ m 3.0286 0.1046 3.2343 2.8228
MRL/MpJ f 4.0167 0.1598 4.331 3.7023
MRL/MpJ m 4.1614 0.1046 4.3672 3.9557
NOD.B10Sn-H2b/J f 3.4137 0.0979 3.6062 3.2213
NOD.B10Sn-H2b/J m 3.96 0.1957 4.345 3.575
NON/ShiLtJ f 3.845 0.0979 4.0375 3.6525
NON/ShiLtJ m 4.1043 0.1046 4.3101 3.8985
NZW/LacJ f 3.8987 0.0979 4.0912 3.7063
NZW/LacJ m 4.298 0.1238 4.5415 4.0545
P/J f 2.7533 0.113 2.9756 2.5311
P/J m 3.2917 0.113 3.5139 3.0694
PL/J f 3.2962 0.0979 3.4887 3.1038
PL/J m 3.995 0.0979 4.1875 3.8025
PWD/PhJ f 2.24 0.1238 2.4835 1.9965
PWD/PhJ m 2.5475 0.1384 2.8197 2.2753
RIIIS/J f 3.07 0.0979 3.2625 2.8775
RIIIS/J m 3.8733 0.113 4.0956 3.6511
SJL/J f 3.46 0.0979 3.6525 3.2675
SJL/J m 3.8367 0.113 4.0589 3.6144
SM/J f 3.5637 0.0979 3.7562 3.3713
SM/J m 3.96 0.0979 4.1525 3.7675
SWR/J f 3.26 0.113 3.4823 3.0377
SWR/J m 3.755 0.113 3.9773 3.5327
WSB/EiJ f 3.1417 0.113 3.3639 2.9194
WSB/EiJ m 3.415 0.113 3.6373 3.1927


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.1674 0.0716 3.3083 3.0265
A/J both 3.6169 0.0692 3.753 3.4808
AKR/J both 4.6243 0.0838 4.7892 4.4595
BALB/cByJ both 3.475 0.0799 3.6322 3.3178
BTBR T+ Itpr3tf/J both 4.0934 0.081 4.2528 3.934
BUB/BnJ both 3.7669 0.0848 3.9336 3.6002
C3H/HeJ both 3.3485 0.0747 3.4956 3.2015
C57BL/10J both 3.6102 0.0747 3.7572 3.4632
C57BL/6J both 3.6737 0.0692 3.8099 3.5376
C57BLKS/J both 3.555 0.0692 3.6911 3.4189
C57BR/cdJ both 3.2686 0.077 3.42 3.1171
C57L/J both 3.8716 0.081 4.031 3.7122
CAST/EiJ both 2.7593 0.077 2.9107 2.6078
CBA/J both 4.2144 0.0848 4.3811 4.0477
DBA/2J both 3.6531 0.081 3.8125 3.4938
FVB/NJ both 3.7008 0.0747 3.8478 3.5538
KK/HlJ both 3.565 0.0867 3.7356 3.3944
LP/J both 3.2648 0.0747 3.4118 3.1178
MOLF/EiJ both 2.7936 0.074 2.9391 2.6481
MRL/MpJ both 4.089 0.0955 4.2769 3.9012
NOD.B10Sn-H2b/J both 3.6869 0.1094 3.9021 3.4717
NON/ShiLtJ both 3.9746 0.0716 4.1155 3.8338
NZW/LacJ both 4.0984 0.0789 4.2536 3.9432
P/J both 3.0225 0.0799 3.1797 2.8653
PL/J both 3.6456 0.0692 3.7817 3.5095
PWD/PhJ both 2.3937 0.0928 2.5764 2.2111
RIIIS/J both 3.4717 0.0747 3.6187 3.3247
SJL/J both 3.6483 0.0747 3.7953 3.5013
SM/J both 3.7619 0.0692 3.898 3.6258
SWR/J both 3.5075 0.0799 3.6647 3.3503
WSB/EiJ both 3.2783 0.0799 3.4355 3.1212




  GWAS USING LINEAR MIXED MODELS