Project measure / variable:   Peters4   LYMPH_M24

ID, description, units MPD:24316   LYMPH_M24   lymphocyte count (LYM; units per volume x 103)   [n/µL]  at age 24mo  
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - lymphocyte count (LYM; units per volume x 103) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means6.51   n/µL 5.88   n/µL
Median of the strain means5.15   n/µL 5.89   n/µL
SD of the strain means± 3.69 ± 2.39
Coefficient of variation (CV)0.567 0.406
Min–max range of strain means3.00   –   14.2   n/µL 2.21   –   10.7   n/µL
Mean sample size per strain6.6   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17.117 17.117 1.1425 0.2873
strain 9 952.5823 105.8425 7.0646 < 0.0001
sex:strain 9 201.4261 22.3807 1.4938 0.1579
Residuals 119 1782.8616 14.982


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.67 1.79   8 0.632 0.383 0.8, 6.78 -0.5
129S1/SvImJ m 4.4 2.65   12 0.764 0.601 2.04, 11.4 -0.62
A/J m 2.88 0.106   2   0.075 0.0369 2.8, 2.95 -1.26
BALB/cByJ f 3.28 1.91   5 0.852 0.582 0.85, 6.2 -0.88
C57BL/10J f 4.52 4.03   7 1.52 0.892 1.93, 12.9 -0.54
C57BL/10J m 6.92 2.65   8 0.938 0.383 2.73, 11.8 0.43
C57BL/6J f 5.15 3.04   6 1.24 0.591 1.67, 9.43 -0.37
C57BL/6J m 6.67 2.69   7 1.02 0.403 3.17, 11.5 0.33
C57BLKS/J f 9.04 1.77   6 0.724 0.196 5.57, 10.4 0.68
C57BLKS/J m 8.08 4.25   7 1.61 0.526 4.62, 17.4 0.92
C57BR/cdJ f 5.51 3.03   7 1.15 0.55 2.62, 11.5 -0.27
C57BR/cdJ m 7.91 2.69   6 1.1 0.341 3.95, 11.4 0.85
LP/J f 14.2 6.37   7 2.41 0.447 8.09, 24.5 2.08
LP/J m 10.7 2.83   5 1.27 0.265 7.28, 15.1 2.01
NON/ShiLtJ f 3.0 1.45   7 0.546 0.482 0.61, 4.6 -0.95
NON/ShiLtJ m 2.21 0.741   6 0.302 0.335 1.44, 3.47 -1.54
NZW/LacJ f 12.2 13.2   6 5.37 1.08 3.41, 38.2 1.54
NZW/LacJ m 6.1 2.51   7 0.949 0.412 1.85, 9.09 0.09
PWD/PhJ f 4.27 0.939   6 0.383 0.22 2.88, 5.52 -0.61
PWD/PhJ m 3.99 0.905   7 0.342 0.227 2.91, 5.03 -0.79
SM/J m 5.06 3.23   7 1.22 0.64 1.43, 11.2 -0.34
WSB/EiJ f 5.82 0.647   7 0.245 0.111 4.6, 6.53 -0.19
WSB/EiJ m 5.69 2.06   7 0.777 0.361 2.69, 8.27 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.6688 1.3685 7.3785 1.959
129S1/SvImJ m 4.4 1.1174 6.6125 2.1875
C57BL/10J f 4.5186 1.463 7.4154 1.6217
C57BL/10J m 6.92 1.3685 9.6297 4.2103
C57BL/6J f 5.1483 1.5802 8.2773 2.0194
C57BL/6J m 6.6686 1.463 9.5654 3.7717
C57BLKS/J f 9.0367 1.5802 12.1656 5.9077
C57BLKS/J m 8.0786 1.463 10.9754 5.1817
C57BR/cdJ f 5.5129 1.463 8.4097 2.616
C57BR/cdJ m 7.905 1.5802 11.0339 4.7761
LP/J f 14.2329 1.463 17.1297 11.336
LP/J m 10.676 1.731 14.1036 7.2484
NON/ShiLtJ f 3.0 1.463 5.8968 0.1032
NON/ShiLtJ m 2.2133 1.5802 5.3423 0.0
NZW/LacJ f 12.1783 1.5802 15.3073 9.0494
NZW/LacJ m 6.0957 1.463 8.9925 3.1989
PWD/PhJ f 4.2667 1.5802 7.3956 1.1377
PWD/PhJ m 3.99 1.463 6.8868 1.0932
WSB/EiJ f 5.82 1.463 8.7168 2.9232
WSB/EiJ m 5.6943 1.463 8.5911 2.7975


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 4.5344 0.8834 6.2835 2.7852
C57BL/10J both 5.7193 1.0016 7.7026 3.736
C57BL/6J both 5.9085 1.0767 8.0405 3.7764
C57BLKS/J both 8.5576 1.0767 10.6896 6.4256
C57BR/cdJ both 6.7089 1.0767 8.8409 4.5769
LP/J both 12.4544 1.1332 14.6983 10.2106
NON/ShiLtJ both 2.6067 1.0767 4.7387 0.4747
NZW/LacJ both 9.137 1.0767 11.269 7.005
PWD/PhJ both 4.1283 1.0767 6.2603 1.9963
WSB/EiJ both 5.7571 1.0345 7.8055 3.7088




  GWAS USING LINEAR MIXED MODELS