Project measure / variable:   Peters4   WBC_M18

ID, description, units MPD:24303   WBC_M18   white blood cell count (WBC; per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - white blood cell count (WBC; per volume x 103) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means7.32   n/µL 9.29   n/µL
Median of the strain means6.88   n/µL 8.37   n/µL
SD of the strain means± 2.61 ± 3.14
Coefficient of variation (CV)0.356 0.338
Min–max range of strain means3.84   –   13.4   n/µL 3.70   –   15.2   n/µL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 318.0857 318.0857 33.6911 < 0.0001
strain 26 2534.1342 97.4667 10.3235 < 0.0001
sex:strain 26 389.9536 14.9982 1.5886 0.0363
Residuals 334 3153.3714 9.4412


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 7.61 2.0   8 0.707 0.263 4.96, 10.5 0.11
129S1/SvImJ m 7.1 2.23   7 0.844 0.315 3.79, 10.0 -0.7
A/J f 4.56 2.06   7 0.779 0.452 2.56, 8.95 -1.06
A/J m 6.37 2.08   15 0.537 0.327 3.85, 11.1 -0.93
BALB/cByJ f 6.58 2.64   8 0.935 0.402 2.25, 9.79 -0.28
BALB/cByJ m 8.6 2.39   7 0.904 0.278 4.13, 11.0 -0.22
BTBR T+ Itpr3tf/J f 6.92 1.63   8 0.576 0.235 5.06, 9.03 -0.15
BTBR T+ Itpr3tf/J m 11.8 2.27   6 0.927 0.193 8.91, 14.0 0.8
BUB/BnJ f 12.6 4.36   5 1.95 0.346 5.13, 15.7 2.02
BUB/BnJ m 15.2 4.42   6 1.8 0.29 8.89, 20.9 1.88
C3H/HeJ f 5.56 2.46   7 0.928 0.441 1.89, 9.37 -0.68
C3H/HeJ m 8.37 2.76   8 0.975 0.33 3.44, 13.3 -0.29
C57BL/10J f 11.4 8.03   7 3.04 0.702 3.49, 23.6 1.56
C57BL/10J m 14.1 4.8   13 1.33 0.341 7.1, 25.8 1.53
C57BL/6J f 8.59 2.88   7 1.09 0.335 4.59, 14.0 0.49
C57BL/6J m 13.8 1.59   7 0.603 0.115 11.4, 15.8 1.43
C57BLKS/J m 12.3 2.74   16 0.686 0.224 7.45, 16.7 0.96
C57BR/cdJ f 7.87 3.15   8 1.11 0.4 4.09, 14.1 0.21
C57BR/cdJ m 12.4 2.69   8 0.951 0.216 7.07, 16.3 0.99
C57L/J f 6.84 2.56   7 0.967 0.374 3.86, 10.8 -0.18
C57L/J m 12.0 3.25   7 1.23 0.271 7.79, 16.3 0.86
CAST/EiJ f 10.3 2.42   8 0.855 0.235 5.55, 13.7 1.14
CBA/J f 6.03 1.36   2   0.96 0.225 5.07, 6.99 -0.5
CBA/J m 5.44 1.94   5 0.867 0.356 2.82, 7.92 -1.23
DBA/2J f 8.14 3.81   6 1.56 0.468 3.67, 12.4 0.31
DBA/2J m 12.1 1.78   6 0.727 0.147 8.95, 13.9 0.89
FVB/NJ f 5.21 1.51   7 0.571 0.29 2.26, 7.14 -0.81
FVB/NJ m 6.74 4.27   12 1.23 0.634 2.65, 18.3 -0.81
KK/HlJ f 10.0 2.08   6 0.85 0.207 7.17, 12.4 1.03
KK/HlJ m 12.4 5.16   7 1.95 0.417 8.93, 23.3 0.99
LP/J m 14.6 2.4   8 0.848 0.165 9.51, 17.5 1.69
MRL/MpJ f 5.25 2.64   7 0.999 0.503 3.31, 11.0 -0.79
MRL/MpJ m 6.25 1.49   8 0.526 0.238 4.89, 8.62 -0.97
NOD.B10Sn-H2b/J f 10.2 4.94   7 1.87 0.483 5.79, 17.3 1.1
NOD.B10Sn-H2b/J m 7.5 2.28   7 0.863 0.305 5.77, 12.5 -0.57
NON/ShiLtJ f 9.04 2.29   5 1.02 0.253 7.04, 12.5 0.66
NON/ShiLtJ m 9.03 5.43   7 2.05 0.602 3.27, 17.8 -0.08
NZO/HlLtJ f 7.97 4.01   10 1.27 0.503 3.41, 17.3 0.25
NZO/HlLtJ m 9.34 1.49   2   1.06 0.16 8.29, 10.4 0.02
NZW/LacJ f 13.4 6.35   7 2.4 0.473 5.13, 25.7 2.33
NZW/LacJ m 10.3 2.24   6 0.914 0.217 5.93, 12.4 0.32
P/J f 3.84 1.55   7 0.585 0.403 2.21, 6.81 -1.34
P/J m 7.26 1.8   5 0.804 0.248 4.3, 8.74 -0.65
PL/J f 4.49 1.44   8 0.511 0.322 1.55, 6.1 -1.09
PL/J m 5.15 1.83   8 0.648 0.356 2.76, 8.58 -1.32
PWD/PhJ f 5.05 1.3   6 0.529 0.257 3.86, 7.49 -0.87
PWD/PhJ m 6.76 1.29   7 0.488 0.191 5.3, 8.78 -0.81
RIIIS/J f 4.97 0.827   8 0.292 0.166 3.47, 6.07 -0.9
RIIIS/J m 6.84 0.814   8 0.288 0.119 6.2, 8.33 -0.78
SJL/J f 4.05 2.33   7 0.88 0.575 1.67, 8.06 -1.25
SJL/J m 3.7 1.2   4 0.601 0.325 2.83, 5.46 -1.78
SM/J f 4.5 1.29   6 0.525 0.286 2.78, 5.86 -1.08
SM/J m 7.42 2.41   9 0.805 0.325 5.9, 13.7 -0.6
SWR/J f 6.8 2.17   7 0.821 0.319 4.2, 9.61 -0.2
SWR/J m 8.33 2.7   8 0.955 0.324 3.29, 12.7 -0.31
WSB/EiJ f 7.26 1.72   8 0.608 0.237 4.45, 9.46 -0.02
WSB/EiJ m 8.25 2.03   9 0.678 0.247 4.35, 10.6 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 7.6075 1.0863 9.7444 5.4706
129S1/SvImJ m 7.0986 1.1614 9.3831 4.8141
A/J f 4.5571 1.1614 6.8416 2.2726
A/J m 6.374 0.7934 7.9346 4.8134
BALB/cByJ f 6.58 1.0863 8.7169 4.4431
BALB/cByJ m 8.6043 1.1614 10.8888 6.3198
BTBR T+ Itpr3tf/J f 6.9213 1.0863 9.0582 4.7843
BTBR T+ Itpr3tf/J m 11.78 1.2544 14.2475 9.3125
BUB/BnJ f 12.626 1.3741 15.329 9.923
BUB/BnJ m 15.2483 1.2544 17.7159 12.7808
C3H/HeJ f 5.5614 1.1614 7.8459 3.2769
C3H/HeJ m 8.3675 1.0863 10.5044 6.2306
C57BL/10J f 11.4486 1.1614 13.7331 9.1641
C57BL/10J m 14.0985 0.8522 15.7748 12.4221
C57BL/6J f 8.5886 1.1614 10.8731 6.3041
C57BL/6J m 13.8143 1.1614 16.0988 11.5298
C57BR/cdJ f 7.8713 1.0863 10.0082 5.7343
C57BR/cdJ m 12.4337 1.0863 14.5707 10.2968
C57L/J f 6.8371 1.1614 9.1216 4.5526
C57L/J m 11.9929 1.1614 14.2774 9.7084
CBA/J f 6.03 2.1727 10.3039 1.7561
CBA/J m 5.44 1.3741 8.143 2.737
DBA/2J f 8.1367 1.2544 10.6042 5.6691
DBA/2J m 12.0917 1.2544 14.5592 9.6241
FVB/NJ f 5.2071 1.1614 7.4916 2.9226
FVB/NJ m 6.7383 0.887 8.4831 4.9935
KK/HlJ f 10.0483 1.2544 12.5159 7.5808
KK/HlJ m 12.3786 1.1614 14.6631 10.0941
MRL/MpJ f 5.2529 1.1614 7.5374 2.9684
MRL/MpJ m 6.2537 1.0863 8.3907 4.1168
NOD.B10Sn-H2b/J f 10.2457 1.1614 12.5302 7.9612
NOD.B10Sn-H2b/J m 7.4986 1.1614 9.7831 5.2141
NON/ShiLtJ f 9.04 1.3741 11.743 6.337
NON/ShiLtJ m 9.0257 1.1614 11.3102 6.7412
NZO/HlLtJ f 7.972 0.9717 9.8833 6.0607
NZO/HlLtJ m 9.345 2.1727 13.6189 5.0711
NZW/LacJ f 13.4329 1.1614 15.7174 11.1484
NZW/LacJ m 10.3217 1.2544 12.7892 7.8541
P/J f 3.8429 1.1614 6.1274 1.5584
P/J m 7.256 1.3741 9.959 4.553
PL/J f 4.4912 1.0863 6.6282 2.3543
PL/J m 5.1475 1.0863 7.2844 3.0106
PWD/PhJ f 5.05 1.2544 7.5175 2.5825
PWD/PhJ m 6.7557 1.1614 9.0402 4.4712
RIIIS/J f 4.9663 1.0863 7.1032 2.8293
RIIIS/J m 6.8425 1.0863 8.9794 4.7056
SJL/J f 4.0471 1.1614 6.3316 1.7626
SJL/J m 3.7 1.5363 6.7221 0.6779
SM/J f 4.4983 1.2544 6.9659 2.0308
SM/J m 7.42 1.0242 9.4347 5.4053
SWR/J f 6.8043 1.1614 9.0888 4.5198
SWR/J m 8.335 1.0863 10.4719 6.1981
WSB/EiJ f 7.2575 1.0863 9.3944 5.1206
WSB/EiJ m 8.2489 1.0242 10.2636 6.2342


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.353 0.7951 8.9171 5.7889
A/J both 5.4656 0.7032 6.8489 4.0822
BALB/cByJ both 7.5921 0.7951 9.1562 6.0281
BTBR T+ Itpr3tf/J both 9.3506 0.8297 10.9827 7.7185
BUB/BnJ both 13.9372 0.9303 15.7671 12.1072
C3H/HeJ both 6.9645 0.7951 8.5286 5.4004
C57BL/10J both 12.7735 0.7202 14.1903 11.3567
C57BL/6J both 11.2014 0.8212 12.8168 9.586
C57BR/cdJ both 10.1525 0.7682 11.6636 8.6414
C57L/J both 9.415 0.8212 11.0304 7.7996
CBA/J both 5.735 1.2854 8.2635 3.2065
DBA/2J both 10.1142 0.887 11.859 8.3694
FVB/NJ both 5.9727 0.7307 7.41 4.5354
KK/HlJ both 11.2135 0.8547 12.8948 9.5321
MRL/MpJ both 5.7533 0.7951 7.3174 4.1892
NOD.B10Sn-H2b/J both 8.8721 0.8212 10.4875 7.2568
NON/ShiLtJ both 9.0329 0.8996 10.8024 7.2633
NZO/HlLtJ both 8.6585 1.19 10.9994 6.3176
NZW/LacJ both 11.8773 0.8547 13.5586 10.1959
P/J both 5.5494 0.8996 7.319 3.7799
PL/J both 4.8194 0.7682 6.3304 3.3083
PWD/PhJ both 5.9029 0.8547 7.5842 4.2215
RIIIS/J both 5.9044 0.7682 7.4154 4.3933
SJL/J both 3.8736 0.9629 5.7678 1.9794
SM/J both 5.9592 0.8097 7.552 4.3664
SWR/J both 7.5696 0.7951 9.1337 6.0056
WSB/EiJ both 7.7532 0.7465 9.2217 6.2847




  GWAS USING LINEAR MIXED MODELS