Project measure / variable:   Cheverud1   FFA_hifat

ID, description, units MPD:17893   FFA_hifat   free fatty acid (serum FFA)   [mg/dL]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure lipid profile
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  STRAIN COMPARISON PLOT
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Cheverud1 - free fatty acid (serum FFA) high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains17 strains
Mean of the strain means1.02   mg/dL 0.945   mg/dL
Median of the strain means0.987   mg/dL 0.931   mg/dL
SD of the strain means± 0.207 ± 0.179
Coefficient of variation (CV)0.203 0.190
Min–max range of strain means0.623   –   1.34   mg/dL 0.574   –   1.29   mg/dL
Mean sample size per strain8.1   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.8185 0.8185 6.3315 0.0127
strain 12 3.3006 0.275 2.1276 0.0169
sex:strain 12 2.5798 0.215 1.6629 0.0778
Residuals 192 24.8216 0.1293


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 0.984 0.486   9 0.162 0.494 0.424, 1.81 -0.17
LGXSM10 m 0.931 0.486   10 0.154 0.523 0.521, 1.89 -0.08
LGXSM15 f 0.879 0.367   9 0.122 0.417 0.306, 1.56 -0.68
LGXSM15 m 0.823 0.331   11 0.0998 0.402 0.435, 1.45 -0.68
LGXSM18 f 0.979 0.498   9 0.166 0.508 0.284, 1.93 -0.19
LGXSM18 m 0.77 0.279   8 0.0987 0.363 0.424, 1.38 -0.98
LGXSM19 f 1.0 0.36   9 0.12 0.359 0.517, 1.64 -0.09
LGXSM19 m 1.12 0.292   8 0.103 0.261 0.679, 1.41 0.98
LGXSM20 f 0.797 0.287   5 0.128 0.36 0.533, 1.25 -1.07
LGXSM20 m 1.23 0.444   6 0.181 0.362 0.819, 1.81 1.59
LGXSM22 f 0.987 0.329   13 0.0914 0.334 0.563, 1.58 -0.15
LGXSM22 m 0.942 0.274   12 0.079 0.291 0.598, 1.36 -0.01
LGXSM23 f 0.99 0.348   8 0.123 0.352 0.688, 1.74 -0.14
LGXSM23 m 0.574 0.229   10 0.0725 0.399 0.126, 0.805 -2.07
LGXSM31 m 0.863 0.0801   4 0.04 0.0928 0.788, 0.974 -0.46
LGXSM33 f 0.924 0.437   10 0.138 0.473 0.325, 1.78 -0.46
LGXSM33 m 0.866 0.313   13 0.0869 0.362 0.354, 1.44 -0.44
LGXSM38 f 1.16 0.331   7 0.125 0.285 0.689, 1.47 0.68
LGXSM38 m 0.835 0.266   7 0.101 0.319 0.497, 1.14 -0.61
LGXSM39 m 0.772 0.241   3 0.139 0.312 0.496, 0.942 -0.96
LGXSM4 f 1.25 0.358   7 0.135 0.287 0.849, 1.75 1.12
LGXSM4 m 0.914 0.19   6 0.0775 0.208 0.716, 1.16 -0.17
LGXSM45 f 0.623 0.227   3 0.131 0.364 0.37, 0.809 -1.91
LGXSM45 m 1.0 0.397   3 0.229 0.396 0.756, 1.46 0.31
LGXSM46 f 1.34 0.356   8 0.126 0.266 0.71, 2.0 1.55
LGXSM46 m 1.1 0.39   10 0.123 0.356 0.573, 1.68 0.87
LGXSM48 m 1.29 0.256   8 0.0905 0.199 0.867, 1.69 1.93
LGXSM5 f 1.33 0.387   8 0.137 0.292 0.856, 1.85 1.51
LGXSM5 m 0.958 0.362   9 0.121 0.378 0.518, 1.65 0.07
SM/J m 1.07 0.311   6 0.127 0.29 0.739, 1.53 0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 0.9839 0.1199 1.2203 0.7475
LGXSM10 m 0.931 0.1137 1.1553 0.7067
LGXSM15 f 0.8793 0.1199 1.1157 0.6429
LGXSM15 m 0.8225 0.1084 1.0364 0.6087
LGXSM18 f 0.9794 0.1199 1.2158 0.7431
LGXSM18 m 0.7703 0.1271 1.021 0.5195
LGXSM19 f 1.0033 0.1199 1.2397 0.7669
LGXSM19 m 1.1183 0.1271 1.369 0.8675
LGXSM20 f 0.7972 0.1608 1.1144 0.48
LGXSM20 m 1.229 0.1468 1.5185 0.9395
LGXSM22 f 0.987 0.0997 1.1837 0.7903
LGXSM22 m 0.9416 0.1038 1.1463 0.7369
LGXSM23 f 0.9904 0.1271 1.2411 0.7396
LGXSM23 m 0.5743 0.1137 0.7986 0.35
LGXSM33 f 0.9241 0.1137 1.1484 0.6998
LGXSM33 m 0.866 0.0997 1.0627 0.6693
LGXSM38 f 1.1597 0.1359 1.4278 0.8917
LGXSM38 m 0.8354 0.1359 1.1035 0.5674
LGXSM4 f 1.2494 0.1359 1.5175 0.9814
LGXSM4 m 0.9145 0.1468 1.204 0.625
LGXSM45 f 0.6233 0.2076 1.0328 0.2139
LGXSM45 m 1.002 0.2076 1.4114 0.5926
LGXSM46 f 1.3388 0.1271 1.5895 1.088
LGXSM46 m 1.0961 0.1137 1.3204 0.8718
LGXSM5 f 1.3256 0.1271 1.5764 1.0749
LGXSM5 m 0.958 0.1199 1.1944 0.7216


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 0.9574 0.0826 1.1204 0.7945
LGXSM15 both 0.8509 0.0808 1.0103 0.6916
LGXSM18 both 0.8748 0.0874 1.0471 0.7025
LGXSM19 both 1.0608 0.0874 1.2331 0.8885
LGXSM20 both 1.0131 0.1089 1.2278 0.7984
LGXSM22 both 0.9643 0.072 1.1062 0.8223
LGXSM23 both 0.7823 0.0853 0.9505 0.6141
LGXSM33 both 0.8951 0.0756 1.0442 0.7459
LGXSM38 both 0.9976 0.0961 1.1871 0.808
LGXSM4 both 1.082 0.1 1.2792 0.8847
LGXSM45 both 0.8127 0.1468 1.1022 0.5231
LGXSM46 both 1.2174 0.0853 1.3856 1.0492
LGXSM5 both 1.1418 0.0874 1.3141 0.9695




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA