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Project measure / variable:   Cheverud1   inguinal_pctfat_hifat

ID, description, units MPD:17882   inguinal_pctfat_hifat   inguinal fat pad weight as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - inguinal fat pad weight as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means5.15   % 4.40   %
Median of the strain means5.45   % 4.34   %
SD of the strain means± 1.47 ± 1.00
Coefficient of variation (CV)0.285 0.227
Min–max range of strain means2.45   –   7.75   % 2.46   –   5.95   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 47.008 47.008 14.1735 0.0002
strain 15 268.8732 17.9249 5.4046 < 0.0001
sex:strain 15 50.1033 3.3402 1.0071 0.4487
Residuals 223 739.6027 3.3166


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 6.47 1.04   9 0.346 0.16 4.73, 8.66 0.9
LGXSM10 m 4.34 1.98   10 0.627 0.456 1.4, 7.43 -0.06
LGXSM15 f 5.57 2.45   9 0.818 0.441 1.34, 9.25 0.28
LGXSM15 m 4.14 2.47   11 0.744 0.596 1.22, 8.43 -0.26
LGXSM18 f 5.25 1.72   8 0.608 0.328 2.83, 8.22 0.07
LGXSM18 m 5.26 1.78   8 0.628 0.338 2.89, 7.69 0.86
LGXSM19 f 5.57 1.79   9 0.598 0.322 2.4, 7.89 0.28
LGXSM19 m 4.37 1.85   8 0.652 0.423 1.88, 7.02 -0.03
LGXSM20 f 4.06 1.23   8 0.435 0.303 2.64, 5.49 -0.74
LGXSM20 m 2.46 1.54   6 0.631 0.627 0.84, 4.33 -1.94
LGXSM22 f 6.73 1.49   13 0.412 0.221 4.47, 10.1 1.07
LGXSM22 m 4.39 1.16   12 0.335 0.264 2.79, 6.23 -0.01
LGXSM23 f 5.76 1.82   8 0.643 0.316 2.41, 7.76 0.41
LGXSM23 m 4.18 1.28   8 0.454 0.307 1.97, 5.94 -0.22
LGXSM31 f 7.75 0.373   5 0.167 0.0482 7.34, 8.28 1.77
LGXSM31 m 5.95 2.14   6 0.875 0.36 2.86, 9.19 1.55
LGXSM33 f 6.74 2.12   7 0.803 0.315 3.42, 10.0 1.08
LGXSM33 m 5.75 2.03   7 0.768 0.353 1.31, 7.23 1.35
LGXSM35 f 4.08 1.68   7 0.633 0.411 1.78, 6.52 -0.73
LGXSM35 m 4.14 1.13   8 0.399 0.273 2.45, 5.39 -0.26
LGXSM39 f 3.59 2.04   8 0.723 0.57 1.61, 6.79 -1.07
LGXSM39 m 3.1 2.49   9 0.829 0.802 0.74, 7.07 -1.3
LGXSM4 f 3.06 1.13   8 0.399 0.369 1.89, 4.72 -1.43
LGXSM4 m 3.49 0.71   5 0.318 0.203 2.67, 4.39 -0.91
LGXSM45 f 2.45 2.01   5 0.897 0.819 -1.84
LGXSM45 m 3.2 0.465   3 0.269 0.145 2.78, 3.7 -1.2
LGXSM46 f 5.9 2.59   9 0.864 0.44 2.7, 10.1 0.51
LGXSM46 m 5.06 2.25   10 0.711 0.444 2.06, 8.23 0.66
LGXSM48 f 5.33 2.91   7 1.1 0.546 1.29, 9.32 0.12
LGXSM48 m 5.23 0.791   8 0.28 0.151 4.07, 6.3 0.83
LGXSM5 f 4.14 1.83   8 0.648 0.442 1.52, 6.64 -0.69
LGXSM5 m 4.01 1.22   8 0.431 0.304 2.01, 5.77 -0.39
SM/J m 5.77 2.19   6 0.895 0.38 2.44, 8.6 1.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 6.4711 0.6071 7.6674 5.2748
LGXSM10 m 4.344 0.5759 5.4789 3.2091
LGXSM15 f 5.5711 0.6071 6.7674 4.3748
LGXSM15 m 4.1355 0.5491 5.2175 3.0534
LGXSM18 f 5.2462 0.6439 6.5151 3.9774
LGXSM18 m 5.2575 0.6439 6.5264 3.9886
LGXSM19 f 5.5656 0.6071 6.7618 4.3693
LGXSM19 m 4.365 0.6439 5.6339 3.0961
LGXSM20 f 4.06 0.6439 5.3289 2.7911
LGXSM20 m 2.465 0.7435 3.9302 0.9998
LGXSM22 f 6.7292 0.5051 7.7246 5.7339
LGXSM22 m 4.3942 0.5257 5.4302 3.3581
LGXSM23 f 5.7588 0.6439 7.0276 4.4899
LGXSM23 m 4.185 0.6439 5.4539 2.9161
LGXSM31 f 7.746 0.8144 9.351 6.141
LGXSM31 m 5.9533 0.7435 7.4185 4.4882
LGXSM33 f 6.7386 0.6883 8.095 5.3821
LGXSM33 m 5.7543 0.6883 7.1108 4.3978
LGXSM35 f 4.0771 0.6883 5.4336 2.7207
LGXSM35 m 4.1375 0.6439 5.4064 2.8686
LGXSM39 f 3.5862 0.6439 4.8551 2.3174
LGXSM39 m 3.0978 0.6071 4.2941 1.9015
LGXSM4 f 3.0563 0.6439 4.3251 1.7874
LGXSM4 m 3.494 0.8144 5.099 1.889
LGXSM45 f 2.448 0.8144 4.053 0.843
LGXSM45 m 3.2 1.0514 5.272 1.128
LGXSM46 f 5.8978 0.6071 7.0941 4.7015
LGXSM46 m 5.062 0.5759 6.1969 3.9271
LGXSM48 f 5.3314 0.6883 6.6879 3.975
LGXSM48 m 5.2325 0.6439 6.5014 3.9636
LGXSM5 f 4.1438 0.6439 5.4126 2.8749
LGXSM5 m 4.0138 0.6439 5.2826 2.7449


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 5.4076 0.4184 6.232 4.5831
LGXSM15 both 4.8533 0.4093 5.6598 4.0467
LGXSM18 both 5.2519 0.4553 6.1491 4.3547
LGXSM19 both 4.9653 0.4425 5.8372 4.0933
LGXSM20 both 3.2625 0.4918 4.2316 2.2934
LGXSM22 both 5.5617 0.3645 6.28 4.8433
LGXSM23 both 4.9719 0.4553 5.8691 4.0747
LGXSM31 both 6.8497 0.5514 7.9363 5.7631
LGXSM33 both 6.2464 0.4867 7.2056 5.2873
LGXSM35 both 4.1073 0.4713 5.036 3.1786
LGXSM39 both 3.342 0.4425 4.214 2.4701
LGXSM4 both 3.2751 0.5191 4.2981 2.2521
LGXSM45 both 2.824 0.665 4.1345 1.5135
LGXSM46 both 5.4799 0.4184 6.3044 4.6554
LGXSM48 both 5.282 0.4713 6.2107 4.3533
LGXSM5 both 4.0788 0.4553 4.976 3.1815




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA