Project measure / variable:   Cheverud1   mesenteric_pctfat_hifat

ID, description, units MPD:17881   mesenteric_pctfat_hifat   mesenteric fat pad weight as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - mesenteric fat pad weight as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means2.76   % 2.66   %
Median of the strain means2.60   % 2.58   %
SD of the strain means± 1.02 ± 0.633
Coefficient of variation (CV)0.369 0.238
Min–max range of strain means1.60   –   5.67   % 1.72   –   3.80   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.9434 2.9434 1.0887 0.2979
strain 15 148.7008 9.9134 3.6669 < 0.0001
sex:strain 15 51.0831 3.4055 1.2597 0.2296
Residuals 224 605.586 2.7035


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 3.26 0.634   9 0.211 0.194 2.04, 4.03 0.49
LGXSM10 m 3.11 0.844   10 0.267 0.271 1.91, 4.69 0.7
LGXSM15 f 2.15 0.991   9 0.33 0.462 0.51, 3.97 -0.6
LGXSM15 m 2.32 0.807   11 0.243 0.348 1.06, 3.64 -0.54
LGXSM18 f 2.36 0.43   8 0.152 0.182 1.68, 2.89 -0.39
LGXSM18 m 2.6 0.449   8 0.159 0.172 2.04, 3.36 -0.1
LGXSM19 f 3.27 1.38   9 0.458 0.421 1.48, 5.52 0.5
LGXSM19 m 2.29 0.826   8 0.292 0.36 1.23, 3.34 -0.59
LGXSM20 f 2.63 0.453   8 0.16 0.172 2.06, 3.35 -0.12
LGXSM20 m 1.8 1.24   6 0.507 0.689 0.04, 3.49 -1.37
LGXSM22 f 5.67 6.16   13 1.71 1.09 3.22, 26.1 2.86
LGXSM22 m 3.12 0.679   12 0.196 0.218 1.99, 4.44 0.72
LGXSM23 f 2.86 0.809   8 0.286 0.283 1.72, 4.28 0.1
LGXSM23 m 3.27 0.778   8 0.275 0.238 2.23, 4.48 0.96
LGXSM31 f 4.16 1.1   5 0.492 0.265 3.02, 5.59 1.38
LGXSM31 m 3.8 0.968   6 0.395 0.255 2.09, 4.8 1.79
LGXSM33 f 2.08 0.509   7 0.193 0.245 1.39, 2.95 -0.66
LGXSM33 m 2.41 1.26   7 0.477 0.523 1.42, 5.17 -0.4
LGXSM35 f 1.6 0.594   7 0.225 0.372 0.84, 2.42 -1.14
LGXSM35 m 2.49 0.442   8 0.156 0.177 1.95, 3.16 -0.28
LGXSM39 f 1.87 1.27   8 0.448 0.677 0.1, 3.91 -0.87
LGXSM39 m 1.83 0.743   9 0.248 0.406 0.67, 3.07 -1.32
LGXSM4 f 2.04 1.17   8 0.415 0.575 1.1, 4.56 -0.7
LGXSM4 m 1.72 0.354   6 0.145 0.206 1.14, 1.98 -1.49
LGXSM45 f 1.85 0.738   5 0.33 0.398 0.67, 2.42 -0.89
LGXSM45 m 2.31 0.492   3 0.284 0.213 1.89, 2.85 -0.56
LGXSM46 f 2.58 0.745   9 0.248 0.289 1.63, 3.68 -0.17
LGXSM46 m 2.62 0.837   10 0.265 0.319 1.44, 3.58 -0.07
LGXSM48 f 3.03 1.37   7 0.517 0.452 0.87, 4.89 0.27
LGXSM48 m 3.72 0.529   8 0.187 0.142 2.96, 4.39 1.67
LGXSM5 f 2.7 0.362   8 0.128 0.134 2.36, 3.29 -0.06
LGXSM5 m 2.58 0.603   8 0.213 0.234 1.9, 3.86 -0.13
SM/J m 3.3 1.52   6 0.621 0.461 2.41, 6.36 1.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 3.2633 0.5481 4.3434 2.1833
LGXSM10 m 3.115 0.52 4.1396 2.0904
LGXSM15 f 2.1467 0.5481 3.2267 1.0666
LGXSM15 m 2.3173 0.4958 3.2942 1.3403
LGXSM18 f 2.3613 0.5813 3.5068 1.2157
LGXSM18 m 2.6025 0.5813 3.7481 1.4569
LGXSM19 f 3.2689 0.5481 4.3489 2.1888
LGXSM19 m 2.295 0.5813 3.4406 1.1494
LGXSM20 f 2.6288 0.5813 3.7743 1.4832
LGXSM20 m 1.8017 0.6713 3.1245 0.4789
LGXSM22 f 5.6715 0.456 6.5702 4.7729
LGXSM22 m 3.1208 0.4746 4.0562 2.1855
LGXSM23 f 2.8575 0.5813 4.0031 1.7119
LGXSM23 m 3.275 0.5813 4.4206 2.1294
LGXSM31 f 4.156 0.7353 5.605 2.707
LGXSM31 m 3.8 0.6713 5.1228 2.4772
LGXSM33 f 2.0771 0.6215 3.3018 0.8525
LGXSM33 m 2.41 0.6215 3.6347 1.1853
LGXSM35 f 1.5971 0.6215 2.8218 0.3725
LGXSM35 m 2.4887 0.5813 3.6343 1.3432
LGXSM39 f 1.87 0.5813 3.0156 0.7244
LGXSM39 m 1.8333 0.5481 2.9134 0.7533
LGXSM4 f 2.0425 0.5813 3.1881 0.8969
LGXSM4 m 1.7167 0.6713 3.0395 0.3939
LGXSM45 f 1.852 0.7353 3.301 0.403
LGXSM45 m 2.3067 0.9493 4.1774 0.436
LGXSM46 f 2.5756 0.5481 3.6556 1.4955
LGXSM46 m 2.624 0.52 3.6486 1.5994
LGXSM48 f 3.0257 0.6215 4.2504 1.8011
LGXSM48 m 3.72 0.5813 4.8656 2.5744
LGXSM5 f 2.7025 0.5813 3.8481 1.5569
LGXSM5 m 2.5787 0.5813 3.7243 1.4332


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 3.1892 0.3777 3.9335 2.4448
LGXSM15 both 2.232 0.3695 2.9601 1.5038
LGXSM18 both 2.4819 0.4111 3.2919 1.6718
LGXSM19 both 2.7819 0.3995 3.5692 1.9947
LGXSM20 both 2.2152 0.444 3.0901 1.3403
LGXSM22 both 4.3962 0.3291 5.0447 3.7476
LGXSM23 both 3.0662 0.4111 3.8763 2.2562
LGXSM31 both 3.978 0.4978 4.959 2.997
LGXSM33 both 2.2436 0.4394 3.1095 1.3776
LGXSM35 both 2.0429 0.4255 2.8814 1.2045
LGXSM39 both 1.8517 0.3995 2.6389 1.0645
LGXSM4 both 1.8796 0.444 2.7545 1.0046
LGXSM45 both 2.0793 0.6004 3.2625 0.8962
LGXSM46 both 2.5998 0.3777 3.3442 1.8554
LGXSM48 both 3.3729 0.4255 4.2113 2.5344
LGXSM5 both 2.6406 0.4111 3.4507 1.8306




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA