Project measure / variable:   Cheverud1   gr_adult_hifat

ID, description, units MPD:17866   gr_adult_hifat   growth rate, age 11 to 20 wks   [g/wk]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 12-16wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Cheverud1 - growth rate, age 11 to 20 wks high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested15 strains17 strains
Mean of the strain means0.136   g/wk 0.114   g/wk
Median of the strain means0.133   g/wk 0.112   g/wk
SD of the strain means± 0.0381 ± 0.0515
Coefficient of variation (CV)0.281 0.453
Min–max range of strain means0.0782   –   0.217   g/wk -0.00733   –   0.226   g/wk
Mean sample size per strain8.5   mice 8.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0513 0.0513 23.1711 < 0.0001
strain 14 0.2412 0.0172 7.7805 < 0.0001
sex:strain 14 0.0905 0.0065 2.9206 0.0004
Residuals 231 0.5116 0.0022


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 0.148 0.033   9 0.011 0.223 0.072, 0.179 0.33
LGXSM10 m 0.105 0.0379   10 0.012 0.361 0.024, 0.141 -0.17
LGXSM15 f 0.103 0.0435   9 0.0145 0.424 0.039, 0.153 -0.86
LGXSM15 m 0.115 0.0703   11 0.0212 0.613 0.001, 0.234 0.03
LGXSM18 f 0.153 0.0277   9 0.00924 0.181 0.109, 0.199 0.46
LGXSM18 m 0.0931 0.0497   8 0.0176 0.534 0.011, 0.172 -0.4
LGXSM19 f 0.15 0.0498   10 0.0157 0.332 0.058, 0.198 0.38
LGXSM19 m 0.112 0.0221   8 0.00781 0.197 0.091, 0.151 -0.03
LGXSM20 f 0.118 0.0414   8 0.0146 0.35 0.067, 0.176 -0.46
LGXSM20 m -0.00733 0.0632   6 0.0258 -8.61 -0.086, 0.059 -2.35
LGXSM22 f 0.133 0.0438   13 0.0121 0.328 0.057, 0.207 -0.07
LGXSM22 m 0.113 0.0367   12 0.0106 0.324 0.058, 0.166 -0.01
LGXSM23 f 0.16 0.0578   8 0.0205 0.363 0.062, 0.222 0.64
LGXSM23 m 0.141 0.0438   10 0.0138 0.311 0.065, 0.227 0.53
LGXSM31 f 0.217 0.0641   5 0.0287 0.296 0.114, 0.264 2.14
LGXSM31 m 0.14 0.0368   7 0.0139 0.262 0.062, 0.166 0.51
LGXSM33 f 0.114 0.0288   15 0.00744 0.254 0.069, 0.156 -0.57
LGXSM33 m 0.0821 0.0422   16 0.0106 0.515 -0.03, 0.136 -0.61
LGXSM38 f 0.114 0.038   7 0.0144 0.334 0.068, 0.16 -0.57
LGXSM38 m 0.0557 0.071   7 0.0268 1.27 -0.073, 0.155 -1.12
LGXSM39 m 0.106 0.0412   3 0.0238 0.387 0.063, 0.145 -0.15
LGXSM4 f 0.0846 0.0557   8 0.0197 0.658 -0.028, 0.15 -1.34
LGXSM4 m 0.112 0.0362   6 0.0148 0.324 0.056, 0.168 -0.03
LGXSM45 f 0.0782 0.0815   5 0.0364 1.04 -0.02, 0.147 -1.51
LGXSM45 m 0.154 0.0357   3 0.0206 0.231 0.128, 0.195 0.79
LGXSM46 f 0.144 0.0537   9 0.0179 0.372 0.055, 0.19 0.22
LGXSM46 m 0.101 0.0769   10 0.0243 0.763 -0.103, 0.176 -0.24
LGXSM48 f 0.198 0.0178   7 0.00674 0.0901 0.165, 0.215 1.64
LGXSM48 m 0.193 0.0446   8 0.0158 0.231 0.109, 0.25 1.54
LGXSM5 f 0.119 0.038   8 0.0134 0.319 0.062, 0.178 -0.44
LGXSM5 m 0.088 0.0234   9 0.00779 0.265 0.037, 0.123 -0.5
SM/J m 0.226 0.047   6 0.0192 0.208 0.143, 0.265 2.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 0.148 0.0157 0.1789 0.1171
LGXSM10 m 0.1049 0.0149 0.1342 0.0756
LGXSM15 f 0.1027 0.0157 0.1336 0.0718
LGXSM15 m 0.1146 0.0142 0.1426 0.0867
LGXSM18 f 0.1528 0.0157 0.1837 0.1219
LGXSM18 m 0.0931 0.0166 0.1259 0.0603
LGXSM19 f 0.15 0.0149 0.1793 0.1207
LGXSM19 m 0.1121 0.0166 0.1449 0.0793
LGXSM20 f 0.1183 0.0166 0.151 0.0855
LGXSM20 m -0.0073 0.0192 0.0305 -0.0452
LGXSM22 f 0.1332 0.0131 0.1589 0.1075
LGXSM22 m 0.1132 0.0136 0.1399 0.0864
LGXSM23 f 0.1595 0.0166 0.1923 0.1267
LGXSM23 m 0.1406 0.0149 0.1699 0.1113
LGXSM31 f 0.2168 0.021 0.2583 0.1753
LGXSM31 m 0.1404 0.0178 0.1755 0.1054
LGXSM33 f 0.1136 0.0122 0.1375 0.0897
LGXSM33 m 0.0821 0.0118 0.1052 0.0589
LGXSM38 f 0.1139 0.0178 0.1489 0.0788
LGXSM38 m 0.0557 0.0178 0.0908 0.0207
LGXSM4 f 0.0846 0.0166 0.1174 0.0518
LGXSM4 m 0.1117 0.0192 0.1495 0.0738
LGXSM45 f 0.0782 0.021 0.1197 0.0367
LGXSM45 m 0.1543 0.0272 0.2079 0.1008
LGXSM46 f 0.1444 0.0157 0.1754 0.1135
LGXSM46 m 0.1008 0.0149 0.1301 0.0715
LGXSM48 f 0.198 0.0178 0.233 0.163
LGXSM48 m 0.1931 0.0166 0.2259 0.1603
LGXSM5 f 0.119 0.0166 0.1518 0.0862
LGXSM5 m 0.088 0.0157 0.1189 0.0571


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 0.1265 0.0108 0.1478 0.1051
LGXSM15 both 0.1087 0.0106 0.1295 0.0878
LGXSM18 both 0.123 0.0114 0.1455 0.1004
LGXSM19 both 0.1311 0.0112 0.1531 0.1091
LGXSM20 both 0.0555 0.0127 0.0805 0.0304
LGXSM22 both 0.1232 0.0094 0.1418 0.1046
LGXSM23 both 0.1501 0.0112 0.172 0.1281
LGXSM31 both 0.1786 0.0138 0.2058 0.1515
LGXSM33 both 0.0978 0.0085 0.1145 0.0812
LGXSM38 both 0.0848 0.0126 0.1096 0.06
LGXSM4 both 0.0981 0.0127 0.1232 0.0731
LGXSM45 both 0.1163 0.0172 0.1501 0.0824
LGXSM46 both 0.1226 0.0108 0.1439 0.1013
LGXSM48 both 0.1956 0.0122 0.2196 0.1716
LGXSM5 both 0.1035 0.0114 0.126 0.081




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA