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Project measure / variable:   Cheverud1   bw3_hifat

ID, description, units MPD:17853   bw3_hifat   body weight on high-fat diet   [g]  at age 6 wks  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   18 strains     sex: both     age: 12-16wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Cheverud1 - body weight on high-fat diet at age 6 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains18 strains
Mean of the strain means9.83   g 9.60   g
Median of the strain means9.82   g 9.30   g
SD of the strain means± 1.18 ± 1.04
Coefficient of variation (CV)0.120 0.108
Min–max range of strain means8.30   –   11.8   g 7.93   –   11.7   g
Mean sample size per strain8.1   mice 8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.0348 2.0348 0.9632 0.3274
strain 15 273.0865 18.2058 8.6174 < 0.0001
sex:strain 15 27.1001 1.8067 0.8552 0.6153
Residuals 243 513.3771 2.1127


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LG/J m 11.0 2.79   3 1.61 0.255 8.78, 14.1 1.35
LGXSM10 f 8.96 1.09   9 0.364 0.122 6.97, 10.2 -0.74
LGXSM10 m 9.12 1.28   12 0.371 0.141 7.35, 11.5 -0.46
LGXSM15 f 10.5 0.977   9 0.326 0.0934 9.54, 12.4 0.57
LGXSM15 m 10.3 1.64   12 0.473 0.159 8.4, 14.7 0.67
LGXSM18 f 9.0 0.662   9 0.221 0.0736 8.14, 9.86 -0.7
LGXSM18 m 8.76 1.35   9 0.451 0.154 7.49, 11.2 -0.81
LGXSM19 f 10.6 1.01   10 0.321 0.0956 8.51, 12.0 0.65
LGXSM19 m 10.5 0.947   8 0.335 0.0898 9.21, 11.7 0.86
LGXSM20 f 8.3 0.896   7 0.339 0.108 7.03, 9.55 -1.3
LGXSM20 m 9.19 2.55   6 1.04 0.278 7.23, 13.7 -0.4
LGXSM22 f 8.35 0.689   13 0.191 0.0825 6.55, 9.07 -1.25
LGXSM22 m 7.93 1.85   14 0.494 0.233 6.1, 13.2 -1.61
LGXSM23 f 10.8 1.49   8 0.526 0.138 8.29, 12.6 0.82
LGXSM23 m 9.66 1.2   10 0.378 0.124 8.03, 11.5 0.06
LGXSM31 f 11.3 1.6   5 0.715 0.142 9.77, 13.3 1.25
LGXSM31 m 10.6 2.11   7 0.796 0.199 8.24, 14.1 0.96
LGXSM33 f 11.8 1.49   8 0.527 0.127 8.31, 13.4 1.67
LGXSM33 m 11.7 2.38   9 0.794 0.204 8.63, 15.0 2.02
LGXSM35 f 10.5 2.25   7 0.851 0.214 7.34, 14.1 0.57
LGXSM35 m 10.6 1.27   9 0.424 0.12 8.11, 12.2 0.96
LGXSM39 f 8.83 0.933   8 0.33 0.106 7.31, 10.1 -0.85
LGXSM39 m 9.42 2.26   9 0.754 0.24 7.88, 15.1 -0.17
LGXSM4 f 8.6 0.72   8 0.255 0.0838 7.18, 9.3 -1.04
LGXSM4 m 9.13 1.11   8 0.393 0.122 7.86, 11.3 -0.45
LGXSM45 f 9.13 0.453   5 0.203 0.0496 8.46, 9.73 -0.59
LGXSM45 m 8.54 0.771   4 0.386 0.0904 7.53, 9.41 -1.02
LGXSM46 f 8.81 0.926   9 0.309 0.105 7.62, 10.5 -0.86
LGXSM46 m 9.12 1.65   10 0.522 0.181 5.01, 10.5 -0.46
LGXSM48 f 11.1 1.18   8 0.417 0.106 9.2, 12.6 1.08
LGXSM48 m 10.2 0.924   8 0.327 0.0902 9.23, 11.5 0.58
LGXSM5 f 10.7 1.73   8 0.61 0.161 7.39, 12.2 0.74
LGXSM5 m 9.04 1.87   9 0.625 0.207 4.68, 10.4 -0.54
SM/J m 8.01 0.693   6 0.283 0.0865 7.25, 9.03 -1.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 8.9589 0.4845 9.9132 8.0045
LGXSM10 m 9.1217 0.4196 9.9482 8.2952
LGXSM15 f 10.4633 0.4845 11.4177 9.509
LGXSM15 m 10.3067 0.4196 11.1332 9.4802
LGXSM18 f 9.0044 0.4845 9.9588 8.0501
LGXSM18 m 8.7622 0.4845 9.7166 7.8079
LGXSM19 f 10.608 0.4596 11.5134 9.7026
LGXSM19 m 10.545 0.5139 11.5572 9.5328
LGXSM20 f 8.2957 0.5494 9.3779 7.2136
LGXSM20 m 9.1917 0.5934 10.3605 8.0228
LGXSM22 f 8.35 0.4031 9.1441 7.5559
LGXSM22 m 7.9336 0.3885 8.6988 7.1684
LGXSM23 f 10.75 0.5139 11.7622 9.7378
LGXSM23 m 9.655 0.4596 10.5604 8.7496
LGXSM31 f 11.294 0.65 12.5744 10.0136
LGXSM31 m 10.5929 0.5494 11.675 9.5107
LGXSM33 f 11.7637 0.5139 12.776 10.7515
LGXSM33 m 11.6656 0.4845 12.6199 10.7112
LGXSM35 f 10.5429 0.5494 11.625 9.4607
LGXSM35 m 10.5822 0.4845 11.5366 9.6279
LGXSM39 f 8.8337 0.5139 9.846 7.8215
LGXSM39 m 9.42 0.4845 10.3744 8.4656
LGXSM4 f 8.5987 0.5139 9.611 7.5865
LGXSM4 m 9.1262 0.5139 10.1385 8.114
LGXSM45 f 9.128 0.65 10.4084 7.8476
LGXSM45 m 8.535 0.7268 9.9665 7.1035
LGXSM46 f 8.81 0.4845 9.7644 7.8556
LGXSM46 m 9.125 0.4596 10.0304 8.2196
LGXSM48 f 11.0925 0.5139 12.1047 10.0803
LGXSM48 m 10.245 0.5139 11.2572 9.2328
LGXSM5 f 10.74 0.5139 11.7522 9.7278
LGXSM5 m 9.0378 0.4845 9.9921 8.0834


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 9.0403 0.3205 9.6715 8.409
LGXSM15 both 10.385 0.3205 11.0162 9.7538
LGXSM18 both 8.8833 0.3426 9.5582 8.2085
LGXSM19 both 10.5765 0.3447 11.2555 9.8975
LGXSM20 both 8.7437 0.4043 9.5401 7.9473
LGXSM22 both 8.1418 0.2799 8.6932 7.5904
LGXSM23 both 10.2025 0.3447 10.8815 9.5235
LGXSM31 both 10.9434 0.4255 11.7816 10.1052
LGXSM33 both 11.7147 0.3531 12.4103 11.0191
LGXSM35 both 10.5625 0.3662 11.284 9.8411
LGXSM39 both 9.1269 0.3531 9.8225 8.4313
LGXSM4 both 8.8625 0.3634 9.5783 8.1467
LGXSM45 both 8.8315 0.4875 9.7918 7.8712
LGXSM46 both 8.9675 0.3339 9.6252 8.3098
LGXSM48 both 10.6687 0.3634 11.3845 9.953
LGXSM5 both 9.8889 0.3531 10.5845 9.1933




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA