Project measure / variable:   Cheverud1   bw2_hifat

ID, description, units MPD:17852   bw2_hifat   body weight on high-fat diet   [g]  at age 5 wks  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   18 strains     sex: both     age: 12-16wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Cheverud1 - body weight on high-fat diet at age 5 wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains18 strains
Mean of the strain means7.20   g 6.98   g
Median of the strain means7.19   g 7.18   g
SD of the strain means± 1.05 ± 0.740
Coefficient of variation (CV)0.145 0.106
Min–max range of strain means5.50   –   9.04   g 5.83   –   7.99   g
Mean sample size per strain8.0   mice 8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.4559 1.4559 1.4498 0.2297
strain 15 183.4276 12.2285 12.1775 < 0.0001
sex:strain 15 15.5326 1.0355 1.0312 0.4236
Residuals 241 242.0087 1.0042


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LG/J m 6.8 1.84   3 1.06 0.27 5.46, 8.89 -0.24
LGXSM10 f 6.19 0.632   7 0.239 0.102 5.3, 6.81 -0.97
LGXSM10 m 6.01 0.912   11 0.275 0.152 4.87, 7.94 -1.3
LGXSM15 f 7.74 0.963   9 0.321 0.124 6.41, 9.39 0.51
LGXSM15 m 7.48 1.16   12 0.334 0.155 6.14, 9.72 0.68
LGXSM18 f 6.81 0.268   9 0.0894 0.0394 6.19, 7.06 -0.38
LGXSM18 m 6.72 0.618   9 0.206 0.092 5.64, 7.62 -0.35
LGXSM19 f 7.57 0.654   10 0.207 0.0863 6.69, 8.88 0.35
LGXSM19 m 7.53 0.501   8 0.177 0.0665 6.82, 8.14 0.75
LGXSM20 f 6.7 0.381   8 0.135 0.0569 6.19, 7.25 -0.48
LGXSM20 m 7.48 2.0   6 0.817 0.268 5.79, 10.9 0.68
LGXSM22 f 6.19 0.692   14 0.185 0.112 5.12, 7.2 -0.97
LGXSM22 m 5.83 0.75   14 0.2 0.129 5.01, 7.25 -1.55
LGXSM23 f 8.46 1.17   8 0.414 0.139 6.48, 10.1 1.2
LGXSM23 m 7.57 0.801   11 0.242 0.106 6.26, 8.49 0.8
LGXSM31 f 9.04 1.59   5 0.712 0.176 7.5, 11.4 1.76
LGXSM31 m 7.99 1.7   7 0.641 0.212 6.36, 10.7 1.37
LGXSM33 f 7.61 1.07   8 0.378 0.141 5.76, 9.11 0.39
LGXSM33 m 7.8 1.76   9 0.586 0.225 5.97, 10.3 1.11
LGXSM35 f 7.98 1.42   7 0.538 0.179 5.77, 10.1 0.74
LGXSM35 m 7.88 0.988   9 0.329 0.125 6.47, 9.21 1.22
LGXSM39 f 6.16 0.632   8 0.224 0.103 5.22, 6.89 -1.0
LGXSM39 m 6.27 0.765   8 0.271 0.122 5.3, 7.43 -0.95
LGXSM4 f 5.5 0.503   8 0.178 0.0915 4.77, 6.08 -1.63
LGXSM4 m 5.9 0.843   8 0.298 0.143 4.95, 7.48 -1.45
LGXSM45 f 6.09 0.187   3 0.108 0.0308 5.88, 6.24 -1.06
LGXSM45 m 6.38 0.772   4 0.386 0.121 5.41, 7.09 -0.8
LGXSM46 f 6.67 0.677   9 0.226 0.102 5.63, 7.66 -0.51
LGXSM46 m 6.99 0.93   10 0.294 0.133 5.03, 8.49 0.02
LGXSM48 f 8.37 1.22   8 0.433 0.146 6.47, 9.94 1.12
LGXSM48 m 7.5 1.01   8 0.356 0.134 6.23, 9.17 0.71
LGXSM5 f 8.17 1.05   8 0.37 0.128 6.34, 9.33 0.92
LGXSM5 m 7.37 1.37   10 0.434 0.186 3.97, 8.55 0.53
SM/J m 6.06 0.512   6 0.209 0.0845 5.38, 6.84 -1.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 6.1871 0.3788 6.9332 5.4411
LGXSM10 m 6.0145 0.3021 6.6097 5.4194
LGXSM15 f 7.74 0.334 8.398 7.082
LGXSM15 m 7.4783 0.2893 8.0482 6.9085
LGXSM18 f 6.8056 0.334 7.4635 6.1476
LGXSM18 m 6.7211 0.334 7.3791 6.0631
LGXSM19 f 7.571 0.3169 8.1952 6.9468
LGXSM19 m 7.5275 0.3543 8.2254 6.8296
LGXSM20 f 6.7 0.3543 7.3979 6.0021
LGXSM20 m 7.475 0.4091 8.2809 6.6691
LGXSM22 f 6.1936 0.2678 6.7211 5.666
LGXSM22 m 5.8314 0.2678 6.359 5.3039
LGXSM23 f 8.4563 0.3543 9.1542 7.7583
LGXSM23 m 7.5718 0.3021 8.167 6.9766
LGXSM31 f 9.038 0.4481 9.9208 8.1552
LGXSM31 m 7.9857 0.3788 8.7318 7.2396
LGXSM33 f 7.6112 0.3543 8.3092 6.9133
LGXSM33 m 7.8 0.334 8.458 7.142
LGXSM35 f 7.9771 0.3788 8.7232 7.2311
LGXSM35 m 7.8833 0.334 8.5413 7.2253
LGXSM39 f 6.1575 0.3543 6.8554 5.4596
LGXSM39 m 6.2725 0.3543 6.9704 5.5746
LGXSM4 f 5.5 0.3543 6.1979 4.8021
LGXSM4 m 5.9037 0.3543 6.6017 5.2058
LGXSM45 f 6.09 0.5786 7.2297 4.9503
LGXSM45 m 6.385 0.501 7.372 5.398
LGXSM46 f 6.6667 0.334 7.3247 6.0087
LGXSM46 m 6.989 0.3169 7.6132 6.3648
LGXSM48 f 8.3687 0.3543 9.0667 7.6708
LGXSM48 m 7.5037 0.3543 8.2017 6.8058
LGXSM5 f 8.1725 0.3543 8.8704 7.4746
LGXSM5 m 7.37 0.3169 7.9942 6.7458


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 6.1008 0.2423 6.578 5.6236
LGXSM15 both 7.6092 0.2209 8.0444 7.1739
LGXSM18 both 6.7633 0.2362 7.2286 6.2981
LGXSM19 both 7.5492 0.2377 8.0174 7.0811
LGXSM20 both 7.0875 0.2706 7.6205 6.5545
LGXSM22 both 6.0125 0.1894 6.3855 5.6395
LGXSM23 both 8.014 0.2328 8.4726 7.5554
LGXSM31 both 8.5119 0.2934 9.0898 7.9339
LGXSM33 both 7.7056 0.2435 8.1852 7.226
LGXSM35 both 7.9302 0.2525 8.4276 7.4328
LGXSM39 both 6.215 0.2505 6.7085 5.7215
LGXSM4 both 5.7019 0.2505 6.1954 5.2084
LGXSM45 both 6.2375 0.3827 6.9913 5.4837
LGXSM46 both 6.8278 0.2302 7.2813 6.3743
LGXSM48 both 7.9362 0.2505 8.4297 7.4428
LGXSM5 both 7.7712 0.2377 8.2394 7.3031




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA