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Project measure / variable:   Cheverud1   inguinal_fatwt_ctrl

ID, description, units MPD:17827   inguinal_fatwt_ctrl   inguinal fat pad weight   [g]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure fat pad weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - inguinal fat pad weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means1.28   g 1.42   g
Median of the strain means1.04   g 1.50   g
SD of the strain means± 0.769 ± 0.534
Coefficient of variation (CV)0.601 0.375
Min–max range of strain means0.318   –   3.56   g 0.389   –   2.49   g
Mean sample size per strain8.4   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2602 0.2602 0.4052 0.5251
strain 15 65.018 4.3345 6.7482 < 0.0001
sex:strain 15 48.3883 3.2259 5.0222 < 0.0001
Residuals 225 144.5237 0.6423


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 2.13 1.09   7 0.414 0.514 0.66, 3.93 1.11
LGXSM10 m 0.609 0.471   8 0.167 0.774 -1.52
LGXSM15 f 0.94 0.587   9 0.196 0.624 0.07, 1.74 -0.44
LGXSM15 m 1.41 0.731   11 0.22 0.518 0.36, 2.75 -0.02
LGXSM18 f 1.02 0.343   9 0.114 0.335 0.34, 1.56 -0.34
LGXSM18 m 1.54 0.735   8 0.26 0.478 0.46, 2.55 0.22
LGXSM19 f 1.42 0.947   8 0.335 0.666 0.39, 3.28 0.18
LGXSM19 m 1.91 0.75   9 0.25 0.392 0.46, 2.86 0.91
LGXSM20 f 1.19 0.763   8 0.27 0.644 0.14, 2.47 -0.12
LGXSM20 m 0.897 0.352   7 0.133 0.392 0.45, 1.47 -0.98
LGXSM22 f 3.56 1.15   12 0.333 0.323 1.52, 5.41 2.97
LGXSM22 m 1.58 1.11   8 0.394 0.703 0.3
LGXSM23 f 1.93 1.56   10 0.492 0.809 0.31, 4.45 0.85
LGXSM23 m 1.46 0.842   13 0.234 0.575 0.07
LGXSM31 f 0.567 0.369   3 0.213 0.65 0.15, 0.85 -0.93
LGXSM31 m 1.42 0.302   4 0.151 0.212 0.98, 1.64 0.0
LGXSM33 f 1.57 0.894   8 0.316 0.57 0.66, 3.07 0.38
LGXSM33 m 2.49 0.678   5 0.303 0.273 1.4, 3.2 2.0
LGXSM35 f 0.906 0.472   8 0.167 0.52 0.39, 1.63 -0.49
LGXSM35 m 1.83 0.774   10 0.245 0.423 0.74, 2.86 0.76
LGXSM39 f 0.899 0.966   10 0.305 1.07 0.01, 3.12 -0.5
LGXSM39 m 0.389 0.52   7 0.197 1.34 -1.94
LGXSM4 f 0.681 0.475   8 0.168 0.698 0.27, 1.64 -0.78
LGXSM4 m 1.77 0.624   7 0.236 0.352 0.85, 2.65 0.65
LGXSM45 f 0.318 0.213   5 0.0952 0.669 -1.25
LGXSM45 m 0.763 0.465   3 0.268 0.609 0.3, 1.23 -1.24
LGXSM46 f 1.06 0.76   9 0.253 0.718 0.26, 2.67 -0.29
LGXSM46 m 1.71 0.62   11 0.187 0.362 0.6, 2.83 0.54
LGXSM48 f 1.32 0.924   10 0.292 0.701 0.19, 2.96 0.05
LGXSM48 m 1.62 0.536   8 0.189 0.33 0.82, 2.2 0.37
LGXSM5 f 0.969 0.819   8 0.29 0.846 0.11, 2.82 -0.4
LGXSM5 m 1.36 0.529   6 0.216 0.389 0.5, 1.95 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 2.13 0.3029 2.7269 1.5331
LGXSM10 m 0.6087 0.2834 1.1671 0.0504
LGXSM15 f 0.94 0.2672 1.4664 0.4136
LGXSM15 m 1.4118 0.2416 1.888 0.9356
LGXSM18 f 1.0233 0.2672 1.5498 0.4969
LGXSM18 m 1.5388 0.2834 2.0971 0.9804
LGXSM19 f 1.4225 0.2834 1.9809 0.8641
LGXSM19 m 1.9133 0.2672 2.4398 1.3869
LGXSM20 f 1.185 0.2834 1.7434 0.6266
LGXSM20 m 0.8971 0.3029 1.4941 0.3002
LGXSM22 f 3.5642 0.2314 4.0201 3.1083
LGXSM22 m 1.5837 0.2834 2.1421 1.0254
LGXSM23 f 1.925 0.2534 2.4244 1.4256
LGXSM23 m 1.4646 0.2223 1.9026 1.0266
LGXSM31 f 0.5667 0.4627 1.4785 0.0
LGXSM31 m 1.425 0.4007 2.2147 0.6353
LGXSM33 f 1.5688 0.2834 2.1271 1.0104
LGXSM33 m 2.486 0.3584 3.1923 1.7797
LGXSM35 f 0.9062 0.2834 1.4646 0.3479
LGXSM35 m 1.828 0.2534 2.3274 1.3286
LGXSM39 f 0.899 0.2534 1.3984 0.3996
LGXSM39 m 0.3886 0.3029 0.9855 0.0
LGXSM4 f 0.6813 0.2834 1.2396 0.1229
LGXSM4 m 1.77 0.3029 2.3669 1.1731
LGXSM45 f 0.318 0.3584 1.0243 0.0
LGXSM45 m 0.7633 0.4627 1.6752 0.0
LGXSM46 f 1.0578 0.2672 1.5842 0.5313
LGXSM46 m 1.7109 0.2416 2.1871 1.2347
LGXSM48 f 1.319 0.2534 1.8184 0.8196
LGXSM48 m 1.6225 0.2834 2.1809 1.0641
LGXSM5 f 0.9687 0.2834 1.5271 0.4104
LGXSM5 m 1.3583 0.3272 2.0031 0.7136


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 1.3694 0.2074 1.7781 0.9607
LGXSM15 both 1.1759 0.1801 1.5308 0.821
LGXSM18 both 1.281 0.1947 1.6647 0.8973
LGXSM19 both 1.6679 0.1947 2.0516 1.2842
LGXSM20 both 1.0411 0.2074 1.4498 0.6324
LGXSM22 both 2.574 0.1829 2.9344 2.2135
LGXSM23 both 1.6948 0.1686 2.027 1.3627
LGXSM31 both 0.9958 0.3061 1.5989 0.3927
LGXSM33 both 2.0274 0.2284 2.4775 1.5772
LGXSM35 both 1.3671 0.1901 1.7417 0.9926
LGXSM39 both 0.6438 0.1975 1.0329 0.2546
LGXSM4 both 1.2256 0.2074 1.6343 0.8169
LGXSM45 both 0.5407 0.2926 1.1174 0.0
LGXSM46 both 1.3843 0.1801 1.7393 1.0294
LGXSM48 both 1.4707 0.1901 1.8453 1.0962
LGXSM5 both 1.1635 0.2164 1.59 0.7371




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA