Project measure / variable:   Project1195   lightdark_tot_dist__centroid__dark__cm

ID, description, units MPD:130095   lightdark_tot_dist__centroid__dark__cm   lightdark_tot_dist__centroid__dark__cm    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
Ontology mappings


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  STRAIN COMPARISON PLOT
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Project1195 - lightdark_tot_dist__centroid__dark__cm



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means488.4   None 419.6   None
Median of the strain means454.6   None 417.6   None
SD of the strain means± 162.6 ± 59.76
Coefficient of variation (CV)0.3329 0.1424
Min–max range of strain means354.1   –   874.2   None 312.2   –   524.7   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 99688.3806 99688.3806 5.3876 0.0213
strain 9 1435080.3444 159453.3716 8.6176 < 0.0001
sex:strain 9 546385.7511 60709.5279 3.281 0.001
Residuals 194 3589617.537 18503.1832


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 362.7 67.23   21 14.671 0.1854 260.8, 487.7 -0.77
C57BL/6J m 312.2 58.4   22 12.452 0.1871 159.1, 427.9 -1.8
GAIA/NachJ f 453.4 99.52   10 31.47 0.2195 347.6, 615.7 -0.22
GAIA/NachJ m 444.6 75.78   15 19.566 0.1704 326.3, 574.7 0.42
GAIC/NachJ f 492.3 115.7   3 66.78 0.235 361.0, 579.2 0.02
GAIC/NachJ m 488.3 135.6   2   95.9 0.2777 392.4, 584.2 1.15
MANB/NachJ f 657.8 435.0   11 131.2 0.6613 405.4, 1937.0 1.04
MANB/NachJ m 524.7 165.0   10 52.17 0.3144 324.6, 861.7 1.76
MANE/NachJ f 474.7 59.84   5 26.759 0.126 389.7, 547.8 -0.08
MANE/NachJ m 407.9 103.6   5 46.336 0.254 276.6, 524.6 -0.2
MANF/NachJ f 371.4 93.34   20 20.872 0.2513 260.3, 577.2 -0.72
MANF/NachJ m 389.8 80.1   12 23.123 0.2055 227.9, 497.9 -0.5
SARA/NachJ f 874.2 178.8   4 89.38 0.2045 638.5, 1016.0 2.37
SARA/NachJ m 435.8 94.0   10 29.725 0.2157 325.9, 596.8 0.27
SARB/NachJ f 354.1 98.26   7 37.14 0.2775 239.5, 506.2 -0.83
SARB/NachJ m 374.0 89.62   11 27.022 0.2397 250.4, 566.9 -0.76
SARC/NachJ f 455.9 90.37   19 20.733 0.1982 243.2, 677.7 -0.2
SARC/NachJ m 427.4 136.8   17 33.184 0.3201 188.4, 725.2 0.13
TUCB/NachJ f 387.1 60.39   7 22.825 0.156 301.6, 468.9 -0.62
TUCB/NachJ m 391.5 13.722   3 7.9221 0.035 381.3, 407.1 -0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 657.7727272727 41.0135046277 738.6623308474 576.883123698
129S1/SvImJ 2 524.72 43.015326548 609.5577319541 439.8822680459
A/J 1 474.74 60.8328581941 594.7186711305 354.7613288695
A/J 2 407.92 60.8328581941 527.8986711305 287.9413288695
BALB/cJ 1 371.415 30.4164290971 431.4043355652 311.4256644348
BALB/cJ 2 389.8416666667 39.2674411147 467.2875658647 312.3957674686
BTBR T+ Itpr3tf/J 1 453.38 43.015326548 538.2177319541 368.5422680459
BTBR T+ Itpr3tf/J 2 444.6066666667 35.121867054 513.8763847409 375.3369485925
C3H/HeJ 1 874.175 68.0132030939 1008.3152322489 740.0347677511
C3H/HeJ 2 435.79 43.015326548 520.6277319541 350.9522680459
C57BL/6J 1 387.0571428571 51.4131489301 488.4576272397 285.6566584745
C57BL/6J 2 391.5 78.5348822294 546.3917983961 236.6082016039
CAST/EiJ 1 492.2666666667 78.5348822294 647.1584650628 337.3748682705
CAST/EiJ 2 488.3 96.1851942358 678.0029357063 298.5970642937
DBA/2J 1 354.1 51.4131489301 455.5004843826 252.6995156174
DBA/2J 2 373.9545454545 41.0135046277 454.8441490292 293.0649418799
FVB/NJ 1 455.8736842105 31.2065978013 517.4214438564 394.3259245646
FVB/NJ 2 427.4235294118 32.9912494462 492.4910995538 362.3559592697
LP/J 1 362.6571428571 29.6833953747 421.2007398114 304.1135459029
LP/J 2 312.2181818182 29.0009272425 369.4157690333 255.020594603


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 591.2463636364 29.7171073621 649.8564496489 532.6362776238
A/J both 441.33 43.015326548 526.1677319541 356.4922680459
BALB/cJ both 380.6283333333 24.8349103618 429.6094207145 331.6472459522
BTBR T+ Itpr3tf/J both 448.9933333333 27.766273892 503.7558538314 394.2308128353
C3H/HeJ both 654.9825 40.2371535807 734.3409316108 575.6240683892
C57BL/6J both 389.2785714286 46.9335690356 481.8441258257 296.7130170314
CAST/EiJ both 490.2833333333 62.0872759045 612.7360517862 367.8306148805
DBA/2J both 364.0272727273 32.883960546 428.8832404548 299.1713049997
FVB/NJ both 441.6486068111 22.706135109 486.4311798771 396.8660337452
LP/J both 337.4376623377 20.7494442208 378.3611174935 296.5142071818




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA