Project measure / variable:   Flaherty1   closed3

ID, description, units MPD:11811   closed3   duration in closed quadrants   [s]  q3  
Data set, strains Flaherty1   inbred   8 strains     sex: both     age: 8-9wks
Procedure elevated zero maze
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  STRAIN COMPARISON PLOT
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Flaherty1 - duration in closed quadrants q3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means45.6   s 47.0   s
Median of the strain means45.0   s 48.1   s
SD of the strain means± 18.4 ± 16.6
Coefficient of variation (CV)0.404 0.354
Min–max range of strain means25.1   –   81.5   s 20.0   –   72.2   s
Mean sample size per strain19.9   mice 19.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 158.142 158.142 0.055 0.8147
strain 7 82156.3501 11736.6214 4.0834 0.0003
sex:strain 7 4002.7089 571.8156 0.1989 0.9855
Residuals 301 865133.0083 2874.196


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 33.5 55.8   20 12.5 1.67 -0.66
129S1/SvImJ m 33.3 46.2   20 10.3 1.39 -0.82
A/J f 25.1 77.5   20 17.3 3.09 -1.11
A/J m 20.0 61.6   20 13.8 3.08 -1.62
BALB/cByJ f 26.4 69.5   20 15.5 2.64 -1.04
BALB/cByJ m 37.7 73.5   20 16.4 1.95 -0.56
C3H/HeJ f 52.2 54.2   20 12.1 1.04 0.36
C3H/HeJ m 51.6 48.1   19 11.0 0.933 0.28
C57BL/6J f 81.5 51.3   20 11.5 0.63 1.95
C57BL/6J m 72.2 47.9   20 10.7 0.663 1.52
CBA/J f 43.4 45.9   20 10.3 1.06 -0.12
CBA/J m 55.6 54.4   19 12.5 0.979 0.52
DBA/2J f 46.7 52.0   20 11.6 1.11 0.06
DBA/2J m 44.6 37.8   20 8.44 0.847 -0.14
FVB/NJ f 55.8 25.8   19 5.92 0.463 0.55
FVB/NJ m 61.0 22.8   20 5.1 0.374 18.7, 133.0 0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 33.46 11.9879 57.0507 9.8693
129S1/SvImJ m 33.29 11.9879 56.8807 9.6993
A/J f 25.1 11.9879 48.6907 1.5093
A/J m 20.0 11.9879 43.5907 0.0
BALB/cByJ f 26.365 11.9879 49.9557 2.7743
BALB/cByJ m 37.665 11.9879 61.2557 14.0743
C3H/HeJ f 52.195 11.9879 75.7857 28.6043
C3H/HeJ m 51.5789 12.2993 75.7825 27.3754
C57BL/6J f 81.52 11.9879 105.1107 57.9293
C57BL/6J m 72.25 11.9879 95.8407 48.6593
CBA/J f 43.375 11.9879 66.9657 19.7843
CBA/J m 55.5526 12.2993 79.7562 31.3491
DBA/2J f 46.695 11.9879 70.2857 23.1043
DBA/2J m 44.595 11.9879 68.1857 21.0043
FVB/NJ f 55.7579 12.2993 79.9615 31.5543
FVB/NJ m 60.99 11.9879 84.5807 37.3993


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 33.375 8.4767 50.0562 16.6938
A/J both 22.55 8.4767 39.2312 5.8688
BALB/cByJ both 32.015 8.4767 48.6962 15.3338
C3H/HeJ both 51.887 8.5875 68.7862 34.9878
C57BL/6J both 76.885 8.4767 93.5662 60.2038
CBA/J both 49.4638 8.5875 66.363 32.5646
DBA/2J both 45.645 8.4767 62.3262 28.9638
FVB/NJ both 58.3739 8.5875 75.2732 41.4747




  GWAS USING LINEAR MIXED MODELS