Project measure / variable:   Flaherty1   closed

ID, description, units MPD:11806   closed   duration in closed quadrants   [s]  total  
Data set, strains Flaherty1   inbred   8 strains     sex: both     age: 8-9wks
Procedure elevated zero maze
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  STRAIN COMPARISON PLOT
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Flaherty1 - duration in closed quadrants total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means246   s 250   s
Median of the strain means258   s 266   s
SD of the strain means± 31.1 ± 31.6
Coefficient of variation (CV)0.126 0.126
Min–max range of strain means204   –   284   s 197   –   281   s
Mean sample size per strain19.9   mice 19.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1322.3213 1322.3213 1.1551 0.2833
strain 7 268732.6885 38390.3841 33.5354 < 0.0001
sex:strain 7 4697.7866 671.1124 0.5862 0.7671
Residuals 301 344576.2218 1144.7715


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 261.0 65.2   20 14.6 0.25 72.1, 300.0 0.48
129S1/SvImJ m 272.0 23.7   20 5.29 0.0871 228.0, 299.0 0.7
A/J f 284.0 19.1   20 4.26 0.0672 249.0, 300.0 1.22
A/J m 281.0 21.1   20 4.73 0.0752 238.0, 300.0 0.98
BALB/cByJ f 261.0 47.7   20 10.7 0.182 99.0, 300.0 0.48
BALB/cByJ m 273.0 27.8   20 6.21 0.102 216.0, 300.0 0.73
C3H/HeJ f 204.0 39.7   20 8.87 0.195 112.0, 280.0 -1.35
C3H/HeJ m 215.0 40.5   19 9.29 0.189 156.0, 300.0 -1.1
C57BL/6J f 255.0 21.6   20 4.82 0.0847 201.0, 289.0 0.29
C57BL/6J m 262.0 14.5   20 3.24 0.0553 239.0, 291.0 0.38
CBA/J f 222.0 45.5   20 10.2 0.205 146.0, 292.0 -0.77
CBA/J m 229.0 39.7   19 9.11 0.173 151.0, 298.0 -0.66
DBA/2J f 275.0 19.8   20 4.43 0.072 217.0, 300.0 0.93
DBA/2J m 270.0 17.9   20 4.0 0.0663 243.0, 300.0 0.64
FVB/NJ f 206.0 29.9   19 6.85 0.145 153.0, 250.0 -1.29
FVB/NJ m 197.0 23.3   20 5.21 0.118 161.0, 249.0 -1.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 260.535 7.5656 275.4232 245.6468
129S1/SvImJ m 271.75 7.5656 286.6382 256.8618
A/J f 283.65 7.5656 298.5382 268.7618
A/J m 281.25 7.5656 296.1382 266.3618
BALB/cByJ f 261.45 7.5656 276.3382 246.5618
BALB/cByJ m 273.2 7.5656 288.0882 258.3118
C3H/HeJ f 203.55 7.5656 218.4382 188.6618
C3H/HeJ m 214.6316 7.7622 229.9066 199.3566
C57BL/6J f 254.65 7.5656 269.5382 239.7618
C57BL/6J m 261.8 7.5656 276.6882 246.9118
CBA/J f 222.0 7.5656 236.8882 207.1118
CBA/J m 229.2632 7.7622 244.5381 213.9882
DBA/2J f 275.3 7.5656 290.1882 260.4118
DBA/2J m 269.9 7.5656 284.7882 255.0118
FVB/NJ f 205.6316 7.7622 220.9066 190.3566
FVB/NJ m 196.85 7.5656 211.7382 181.9618


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 266.1425 5.3497 276.67 255.615
A/J both 282.45 5.3497 292.9775 271.9225
BALB/cByJ both 267.325 5.3497 277.8525 256.7975
C3H/HeJ both 209.0908 5.4196 219.756 198.4256
C57BL/6J both 258.225 5.3497 268.7525 247.6975
CBA/J both 225.6316 5.4196 236.2967 214.9664
DBA/2J both 272.6 5.3497 283.1275 262.0725
FVB/NJ both 201.2408 5.4196 211.906 190.5756




  GWAS USING LINEAR MIXED MODELS