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Project measure / variable:   Schoonjans1   GHDCA_feces_CD

ID, description, units MPD:112774   GHDCA_feces_CD   bile acid glycohyodeoxycholic acid amount in feces, at 24 wks   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   4 strains     sex: m     age: 24wks
Procedure biomarker quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Schoonjans1 - bile acid glycohyodeoxycholic acid amount in feces, at 24 wks CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested4 strains
Mean of the strain means0.00630514   ng/mL
Median of the strain means0.00316122   ng/mL
SD of the strain means± 0.00663417
Coefficient of variation (CV)1.0522
Min–max range of strain means0.00265811   –   0.01624   ng/mL
Mean sample size per strain1.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 0.0 0.0 1.0863 0.3739
Residuals 3 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.00265811 0.00047918   2   0.00033883 0.1803 0.00231928, 0.00299694 -0.55
BXD45 m 0.01624 0.0   1   0.0 0.0 0.01624, 0.01624 1.5
BXD49 m 0.00352583 0.00106436   3 0.00061451 0.3019 0.00270323, 0.00472793 -0.42
BXD69 m 0.00279661 0.0   1   0.0 0.0 0.00279661, 0.00279661 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.00265811 0.0006448953 0.0047104545 0.0006057655
BXD49 m 0.0035258333 0.0005265548 0.0052015656 0.001850101




GWAS analysis not available: SNP data is not available for enough strains (at least 4)