Project measure / variable:   Schoonjans1   aMCA_plasma_t0_CD

ID, description, units MPD:112650   aMCA_plasma_t0_CD   plasma bile acid α-muricholic acid amount, glucose kinetic test, at 20 wks of age, at 0 min   [ng/mL]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure biomarker quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Schoonjans1 - plasma bile acid α-muricholic acid amount, glucose kinetic test, at 20 wks of age, at 0 min CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means7.4282   ng/mL
Median of the strain means5.0869   ng/mL
SD of the strain means± 6.5298
Coefficient of variation (CV)0.8791
Min–max range of strain means1.156   –   26.322   ng/mL
Mean sample size per strain3.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 32 5884.0163 183.8755 2.0947 0.0031
Residuals 96 8427.1251 87.7826


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 6.6471 0.0   1   0.0 0.0 6.6471, 6.6471 -0.12
BXD100 m 1.4165 0.50372   4 0.25186 0.3556 1.042, 2.16 -0.92
BXD11 m 9.7955 10.027   4 5.0134 1.0236 3.188, 24.438 0.36
BXD12 m 8.6367 8.2204   3 4.746 0.9518 1.174, 17.448 0.19
BXD27 m 5.1093 3.0079   3 1.7366 0.5887 1.804, 7.686 -0.36
BXD32 m 9.8004 8.4904   5 3.797 0.8663 2.814, 21.97 0.36
BXD34 m 18.779 15.036   5 6.7242 0.8007 1.534, 36.218 1.74
BXD39 m 2.783 1.6617   2   1.175 0.5971 1.608, 3.958 -0.71
BXD40 m 22.571 14.02   4 7.0099 0.6211 6.516, 39.596 2.32
BXD43 m 1.742 0.37445   3 0.21619 0.215 1.388, 2.134 -0.87
BXD45 m 3.5005 2.6606   4 1.3303 0.7601 1.23, 6.974 -0.6
BXD48 m 4.2136 1.2729   5 0.56925 0.3021 3.05, 6.296 -0.49
BXD48a m 5.1395 2.5174   4 1.2587 0.4898 2.258, 7.35 -0.35
BXD49 m 26.322 27.681   4 13.84 1.0516 2.7, 60.26 2.89
BXD51 m 1.156 0.0   1   0.0 0.0 1.156, 1.156 -0.96
BXD53 m 6.0893 7.8601   3 4.538 1.2908 1.164, 15.154 -0.21
BXD55 m 12.322 9.5556   5 4.2734 0.7755 2.892, 28.462 0.75
BXD6 m 12.517 8.2341   5 3.6824 0.6578 1.93, 20.634 0.78
BXD62 m 2.9448 1.2389   5 0.55407 0.4207 1.772, 4.814 -0.69
BXD63 m 1.715 0.47224   4 0.23612 0.2754 1.086, 2.19 -0.87
BXD64 m 3.578 1.8944   5 0.84722 0.5295 1.392, 6.128 -0.59
BXD66 m 2.333 1.7653   4 0.88264 0.7567 1.2, 4.964 -0.78
BXD67 m 1.897 0.8556   2   0.605 0.451 1.292, 2.502 -0.85
BXD69 m 3.9264 0.51067   5 0.22838 0.1301 3.248, 4.386 -0.54
BXD73 m 8.572 6.8653   3 3.9637 0.8009 1.116, 14.632 0.18
BXD75 m 11.739 4.5823   5 2.0493 0.3903 7.658, 19.604 0.66
BXD77 m 20.086 10.58   5 4.7317 0.5268 7.356, 36.642 1.94
BXD79 m 2.332 0.16688   2   0.118 0.0716 2.214, 2.45 -0.78
BXD8 m 1.171 0.18526   2   0.131 0.1582 1.04, 1.302 -0.96
BXD81 m 4.0421 1.496   3 0.8637 0.3701 2.682, 5.6444 -0.52
BXD84 m 1.6357 0.37303   4 0.18652 0.2281 1.126, 1.9929 -0.89
BXD87 m 15.097 20.289   5 9.0735 1.3439 3.916, 51.2 1.17
BXD89 m 2.6487 1.4676   3 0.8473 0.5541 1.638, 4.332 -0.73
BXD90 m 6.97 0.0   1   0.0 0.0 6.97, 6.97 -0.07
C57BL/6J m 13.124 13.25   5 5.9257 1.0096 1.162, 33.588 0.87
DBA/2J m 5.0645 4.6283   4 2.3141 0.9139 1.528, 11.85 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 1.4165 4.6846171861 10.7153916198 -7.8823916198
BXD11 m 9.7955 4.6846171861 19.0943916198 0.4966083802
BXD12 m 8.6366666667 5.4093299868 19.3741018264 -2.1007684931
BXD27 m 5.1093333333 5.4093299868 15.8467684931 -5.6281018264
BXD32 m 9.8004 4.1900489906 18.1175815109 1.4832184891
BXD34 m 18.7792 4.1900489906 27.0963815109 10.4620184891
BXD39 m 2.783 6.625049159 15.9336186438 -10.3676186438
BXD40 m 22.571 4.6846171861 31.8698916198 13.2721083802
BXD43 m 1.742 5.4093299868 12.4794351597 -8.9954351597
BXD45 m 3.5005 4.6846171861 12.7993916198 -5.7983916198
BXD48 m 4.2136 4.1900489906 12.5307815109 -4.1035815109
BXD48a m 5.1395 4.6846171861 14.4383916198 -4.1593916198
BXD49 m 26.322 4.6846171861 35.6208916198 17.0231083802
BXD53 m 6.0893333333 5.4093299868 16.8267684931 -4.6481018264
BXD55 m 12.3224 4.1900489906 20.6395815109 4.0052184891
BXD6 m 12.5168 4.1900489906 20.8339815109 4.1996184891
BXD62 m 2.9448 4.1900489906 11.2619815109 -5.3723815109
BXD63 m 1.715 4.6846171861 11.0138916198 -7.5838916198
BXD64 m 3.578 4.1900489906 11.8951815109 -4.7391815109
BXD66 m 2.333 4.6846171861 11.6318916198 -6.9658916198
BXD67 m 1.897 6.625049159 15.0476186438 -11.2536186438
BXD69 m 3.9264 4.1900489906 12.2435815109 -4.3907815109
BXD73 m 8.572 5.4093299868 19.3094351597 -2.1654351597
BXD75 m 11.7394 4.1900489906 20.0565815109 3.4222184891
BXD77 m 20.086 4.1900489906 28.4031815109 11.7688184891
BXD79 m 2.332 6.625049159 15.4826186438 -10.8186186438
BXD8 m 1.171 6.625049159 14.3216186438 -11.9796186438
BXD81 m 4.0421333333 5.4093299868 14.7795684931 -6.6953018264
BXD84 m 1.635725 4.6846171861 10.9346166198 -7.6631666198
BXD87 m 15.0968 4.1900489906 23.4139815109 6.7796184891
BXD89 m 2.6486666667 5.4093299868 13.3861018264 -8.0887684931
C57BL/6J m 13.1244 4.1900489906 21.4415815109 4.8072184891
DBA/2J m 5.0645 4.6846171861 14.3633916198 -4.2343916198




  GWAS USING LINEAR MIXED MODELS