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Project measure / variable:   Schoonjans1   bw_29wks_CD

ID, description, units MPD:112638   bw_29wks_CD   body weight at sacrifice, 29 wks of age   [g]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 29wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schoonjans1 - body weight at sacrifice, 29 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means33.753   g
Median of the strain means34.29   g
SD of the strain means± 3.3936
Coefficient of variation (CV)0.1005
Min–max range of strain means26.26   –   40.95   g
Mean sample size per strain4.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 1869.4378 53.4125 3.5752 < 0.0001
Residuals 132 1972.046 14.9397


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 28.3 1.9292   4 0.96458 0.0682 26.86, 31.09 -1.61
BXD100 m 39.582 1.9232   6 0.78514 0.0486 35.99, 41.2 1.72
BXD11 m 36.57 4.5951   4 2.2976 0.1257 31.62, 42.45 0.83
BXD12 m 29.805 2.0098   4 1.0049 0.0674 27.05, 31.43 -1.16
BXD27 m 37.075 2.1281   4 1.0641 0.0574 34.07, 39.08 0.98
BXD32 m 30.702 2.8119   5 1.2575 0.0916 27.35, 34.61 -0.9
BXD34 m 36.375 1.0458   4 0.52292 0.0288 35.04, 37.37 0.77
BXD39 m 37.35 3.9213   5 1.7537 0.105 31.99, 42.13 1.06
BXD40 m 29.42 2.6202   5 1.1718 0.0891 25.27, 32.18 -1.28
BXD43 m 31.083 4.5802   3 2.6444 0.1474 26.53, 35.69 -0.79
BXD45 m 34.53 1.9896   4 0.99482 0.0576 32.81, 37.39 0.23
BXD48 m 33.684 6.2874   5 2.8118 0.1867 28.03, 43.57 -0.02
BXD48a m 38.63 5.1265   4 2.5632 0.1327 33.84, 45.28 1.44
BXD49 m 35.992 1.7145   4 0.85727 0.0476 34.62, 38.49 0.66
BXD51 m 40.95 10.45   5 4.6735 0.2552 35.02, 59.53 2.12
BXD53 m 33.726 2.3848   5 1.0665 0.0707 31.72, 36.57 -0.01
BXD55 m 30.366 1.7516   5 0.78336 0.0577 28.67, 32.32 -1.0
BXD6 m 33.342 3.2795   5 1.4666 0.0984 30.17, 38.08 -0.12
BXD62 m 34.638 4.4718   5 1.9998 0.1291 27.69, 38.68 0.26
BXD63 m 32.492 3.5601   5 1.5921 0.1096 29.47, 36.67 -0.37
BXD64 m 35.373 2.9069   3 1.6783 0.0822 32.63, 38.42 0.48
BXD66 m 34.05 6.3402   7 2.3964 0.1862 25.56, 43.4 0.09
BXD67 m 34.675 1.8914   4 0.94568 0.0545 31.89, 36.11 0.27
BXD69 m 35.814 2.7706   5 1.2391 0.0774 32.66, 38.18 0.61
BXD73 m 32.17 2.0933   4 1.0467 0.0651 30.1, 34.68 -0.47
BXD75 m 36.278 2.3555   5 1.0534 0.0649 32.86, 38.35 0.74
BXD77 m 35.246 1.7018   5 0.76107 0.0483 33.07, 37.47 0.44
BXD79 m 36.762 4.9579   5 2.2173 0.1349 31.08, 43.9 0.89
BXD8 m 28.868 1.1435   5 0.51139 0.0396 27.13, 29.85 -1.44
BXD81 m 26.26 6.8508   4 3.4254 0.2609 20.7, 36.24 -2.21
BXD84 m 35.322 1.5504   5 0.69337 0.0439 33.84, 37.49 0.46
BXD87 m 27.99 1.4549   5 0.65063 0.052 26.67, 30.07 -1.7
BXD89 m 31.444 1.6811   5 0.75179 0.0535 29.2, 33.06 -0.68
BXD90 m 31.976 2.0773   5 0.92901 0.065 29.96, 34.41 -0.52
C57BL/6J m 35.164 2.9951   5 1.3394 0.0852 31.22, 38.48 0.42
DBA/2J m 33.098 5.2667   5 2.3553 0.1591 27.58, 39.16 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 28.3 1.9325981353 32.1228701333 24.4771298667
BXD100 m 39.5816666667 1.5779597697 42.7030270598 36.4603062735
BXD11 m 36.57 1.9325981353 40.3928701333 32.7471298667
BXD12 m 29.805 1.9325981353 33.6278701333 25.9821298667
BXD27 m 37.075 1.9325981353 40.8978701333 33.2521298667
BXD32 m 30.702 1.7285683214 34.1212789948 27.2827210052
BXD34 m 36.375 1.9325981353 40.1978701333 32.5521298667
BXD39 m 37.35 1.7285683214 40.7692789948 33.9307210052
BXD40 m 29.42 1.7285683214 32.8392789948 26.0007210052
BXD43 m 31.0833333333 2.2315721073 35.4976035344 26.6690631323
BXD45 m 34.53 1.9325981353 38.3528701333 30.7071298667
BXD48 m 33.684 1.7285683214 37.1032789948 30.2647210052
BXD48a m 38.63 1.9325981353 42.4528701333 34.8071298667
BXD49 m 35.9925 1.9325981353 39.8153701333 32.1696298667
BXD51 m 40.95 1.7285683214 44.3692789948 37.5307210052
BXD53 m 33.726 1.7285683214 37.1452789948 30.3067210052
BXD55 m 30.366 1.7285683214 33.7852789948 26.9467210052
BXD6 m 33.342 1.7285683214 36.7612789948 29.9227210052
BXD62 m 34.638 1.7285683214 38.0572789948 31.2187210052
BXD63 m 32.492 1.7285683214 35.9112789948 29.0727210052
BXD64 m 35.3733333333 2.2315721073 39.7876035344 30.9590631323
BXD66 m 34.05 1.4609068715 36.9398181906 31.1601818094
BXD67 m 34.675 1.9325981353 38.4978701333 30.8521298667
BXD69 m 35.814 1.7285683214 39.2332789948 32.3947210052
BXD73 m 32.17 1.9325981353 35.9928701333 28.3471298667
BXD75 m 36.278 1.7285683214 39.6972789948 32.8587210052
BXD77 m 35.246 1.7285683214 38.6652789948 31.8267210052
BXD79 m 36.762 1.7285683214 40.1812789948 33.3427210052
BXD8 m 28.868 1.7285683214 32.2872789948 25.4487210052
BXD81 m 26.26 1.9325981353 30.0828701333 22.4371298667
BXD84 m 35.322 1.7285683214 38.7412789948 31.9027210052
BXD87 m 27.99 1.7285683214 31.4092789948 24.5707210052
BXD89 m 31.444 1.7285683214 34.8632789948 28.0247210052
BXD90 m 31.976 1.7285683214 35.3952789948 28.5567210052
C57BL/6J m 35.164 1.7285683214 38.5832789948 31.7447210052
DBA/2J m 33.098 1.7285683214 36.5172789948 29.6787210052




  GWAS USING LINEAR MIXED MODELS