Project measure / variable:   Auwerx1   soleus_wt_HFD

ID, description, units MPD:111413   soleus_wt_HFD   soleus muscle weight   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age:
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - soleus muscle weight HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means0.01919   g
Median of the strain means0.01878   g
SD of the strain means± 0.00345735
Coefficient of variation (CV)0.1801
Min–max range of strain means0.01356   –   0.02794   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 0.003 0.0001 5.5554 < 0.0001
Residuals 182 0.0018 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.01702 0.00086139   5 0.00038523 0.0506 0.0156, 0.0176 -0.63
BXD100 m 0.02086 0.00094763   5 0.00042379 0.0454 0.0199, 0.0224 0.48
BXD101 m 0.01947 0.00270724   4 0.00135362 0.139 0.0172, 0.0233 0.08
BXD11 m 0.0222 0.0037   3 0.0021362 0.1667 0.0182, 0.0255 0.87
BXD12 m 0.0136 0.00238432   5 0.0010663 0.1753 0.0109, 0.0172 -1.62
BXD16 m 0.01824 0.00270426   5 0.00120938 0.1483 0.014, 0.0206 -0.28
BXD2 m 0.01396 0.002002   5 0.00089532 0.1434 0.0116, 0.0167 -1.51
BXD27 m 0.0202 0.00289252   4 0.00144626 0.1432 0.0163, 0.023 0.29
BXD32 m 0.01737 0.00030551   3 0.00017638 0.0176 0.0171, 0.0177 -0.53
BXD34 m 0.01466 0.0031469   5 0.00140734 0.2147 0.0119, 0.0199 -1.31
BXD39 m 0.023 0.00324037   5 0.00144914 0.1409 0.02, 0.027 1.1
BXD40 m 0.01473 0.00099121   4 0.00049561 0.0673 0.0138, 0.016 -1.29
BXD43 m 0.01867 0.00055076   3 0.00031798 0.0295 0.0181, 0.0192 -0.15
BXD44 m 0.017 0.00425088   3 0.00245425 0.2501 0.0143, 0.0219 -0.63
BXD45 m 0.0198 0.00809815   4 0.00404907 0.409 0.0117, 0.0303 0.18
BXD48 m 0.02794 0.00311657   5 0.00139377 0.1115 0.023, 0.0311 2.53
BXD48a m 0.02313 0.00360879   3 0.00208353 0.156 0.021, 0.0273 1.14
BXD49 m 0.02255 0.00244199   4 0.001221 0.1083 0.0199, 0.0258 0.97
BXD50 m 0.01954 0.00104307   5 0.00046648 0.0534 0.0182, 0.021 0.1
BXD51 m 0.01973 0.00275121   4 0.00137561 0.1395 0.0171, 0.0222 0.16
BXD53 m 0.025 0.004   5 0.00178885 0.16 0.018, 0.028 1.68
BXD55 m 0.01503 0.00619267   4 0.00309634 0.4122 0.01, 0.0227 -1.2
BXD56 m 0.01885 0.00162635   2   0.00115 0.0863 0.0177, 0.02 -0.1
BXD6 m 0.02204 0.00378722   5 0.00169369 0.1718 0.0161, 0.0262 0.82
BXD60 m 0.019 0.00223607   5 0.001 0.1177 0.016, 0.022 -0.06
BXD61 m 0.01488 0.00220386   5 0.0009856 0.1481 0.0124, 0.0169 -1.25
BXD62 m 0.01685 0.00294109   4 0.00147054 0.1745 0.0133, 0.0199 -0.68
BXD63 m 0.0165 0.00113137   2   0.0008 0.0686 0.0157, 0.0173 -0.78
BXD64 m 0.02002 0.00289525   4 0.00144763 0.1446 0.0163, 0.0229 0.24
BXD65 m 0.02227 0.00236414   4 0.00118207 0.1061 0.0188, 0.0241 0.89
BXD65a m 0.02073 0.00295903   4 0.00147951 0.1428 0.0174, 0.0246 0.44
BXD66 m 0.01584 0.00277363   5 0.0012404 0.1751 0.0133, 0.0202 -0.97
BXD67 m 0.01806 0.00187563   5 0.00083881 0.1039 0.015, 0.02 -0.33
BXD68 m 0.0233 0.00417971   3 0.00241316 0.1794 0.02, 0.028 1.19
BXD69 m 0.01884 0.00263306   5 0.00117754 0.1398 0.0151, 0.022 -0.1
BXD70 m 0.01857 0.00262742   3 0.00151694 0.1415 0.0156, 0.0206 -0.18
BXD71 m 0.02577 0.00196554   3 0.0011348 0.0763 0.0243, 0.028 1.9
BXD73 m 0.01878 0.00636206   4 0.00318103 0.3389 0.0138, 0.0275 -0.12
BXD73a m 0.01776 0.00170968   5 0.00076459 0.0963 0.0163, 0.0198 -0.41
BXD73b m 0.02218 0.00184986   5 0.00082728 0.0834 0.0204, 0.0252 0.86
BXD75 m 0.0153 0.00078422   5 0.00035071 0.0513 0.0144, 0.0161 -1.13
BXD77 m 0.01784 0.00230174   5 0.00102937 0.129 0.0141, 0.0203 -0.39
BXD79 m 0.01356 0.00464683   5 0.00207812 0.3427 0.0099, 0.0204 -1.63
BXD8 m 0.01768 0.00287176   5 0.00128429 0.1624 0.014, 0.0211 -0.44
BXD81 m 0.01873 0.00123423   3 0.00071259 0.0659 0.0177, 0.0201 -0.13
BXD83 m 0.01535 0.00182665   4 0.00091333 0.119 0.014, 0.018 -1.11
BXD84 m 0.01877 0.00118462   3 0.00068394 0.0631 0.0174, 0.0195 -0.12
BXD85 m 0.01935 0.00266396   4 0.00133198 0.1377 0.0163, 0.0228 0.05
BXD87 m 0.01636 0.00478519   5 0.00214 0.2925 0.0122, 0.0233 -0.82
BXD89 m 0.01735 0.00257358   4 0.00128679 0.1483 0.015, 0.021 -0.53
BXD90 m 0.01405 0.00152862   4 0.00076431 0.1088 0.0129, 0.0163 -1.49
BXD95 m 0.02668 0.00516014   5 0.00230768 0.1934 0.0193, 0.033 2.17
BXD98 m 0.0248 0.00107935   5 0.0004827 0.0435 0.0235, 0.0262 1.62
BXD99 m 0.02334 0.00288756   5 0.00129136 0.1237 0.0214, 0.0284 1.2
C57BL/6J m 0.0232 0.00454533   5 0.00203273 0.1959 0.018, 0.029 1.16
DBA/2J m 0.01848 0.00181714   5 0.00081265 0.0983 0.0167, 0.0208 -0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.01702 0.0013930359 0.019768577 0.014271423
BXD100 m 0.02086 0.0013930359 0.023608577 0.018111423
BXD101 m 0.019475 0.0015574615 0.0225480025 0.0164019975
BXD11 m 0.0222 0.0017984016 0.0257483976 0.0186516024
BXD12 m 0.0136 0.0013930359 0.016348577 0.010851423
BXD16 m 0.01824 0.0013930359 0.020988577 0.015491423
BXD2 m 0.01396 0.0013930359 0.016708577 0.011211423
BXD27 m 0.0202 0.0015574615 0.0232730025 0.0171269975
BXD32 m 0.0173666667 0.0017984016 0.0209150643 0.013818269
BXD34 m 0.01466 0.0013930359 0.017408577 0.011911423
BXD39 m 0.023 0.0013930359 0.025748577 0.020251423
BXD40 m 0.014725 0.0015574615 0.0177980025 0.0116519975
BXD43 m 0.0186666667 0.0017984016 0.0222150643 0.015118269
BXD44 m 0.017 0.0017984016 0.0205483976 0.0134516024
BXD45 m 0.0198 0.0015574615 0.0228730025 0.0167269975
BXD48 m 0.02794 0.0013930359 0.030688577 0.025191423
BXD48a m 0.0231333333 0.0017984016 0.026681731 0.0195849357
BXD49 m 0.02255 0.0015574615 0.0256230025 0.0194769975
BXD50 m 0.01954 0.0013930359 0.022288577 0.016791423
BXD51 m 0.019725 0.0015574615 0.0227980025 0.0166519975
BXD53 m 0.025 0.0013930359 0.027748577 0.022251423
BXD55 m 0.015025 0.0015574615 0.0180980025 0.0119519975
BXD56 m 0.01885 0.0022025832 0.0231958818 0.0145041182
BXD6 m 0.02204 0.0013930359 0.024788577 0.019291423
BXD60 m 0.019 0.0013930359 0.021748577 0.016251423
BXD61 m 0.01488 0.0013930359 0.017628577 0.012131423
BXD62 m 0.01685 0.0015574615 0.0199230025 0.0137769975
BXD63 m 0.0165 0.0022025832 0.0208458818 0.0121541182
BXD64 m 0.020025 0.0015574615 0.0230980025 0.0169519975
BXD65 m 0.022275 0.0015574615 0.0253480025 0.0192019975
BXD65a m 0.020725 0.0015574615 0.0237980025 0.0176519975
BXD66 m 0.01584 0.0013930359 0.018588577 0.013091423
BXD67 m 0.01806 0.0013930359 0.020808577 0.015311423
BXD68 m 0.0233 0.0017984016 0.0268483976 0.0197516024
BXD69 m 0.01884 0.0013930359 0.021588577 0.016091423
BXD70 m 0.0185666667 0.0017984016 0.0221150643 0.015018269
BXD71 m 0.0257666667 0.0017984016 0.0293150643 0.022218269
BXD73 m 0.018775 0.0015574615 0.0218480025 0.0157019975
BXD73a m 0.01776 0.0013930359 0.020508577 0.015011423
BXD73b m 0.02218 0.0013930359 0.024928577 0.019431423
BXD75 m 0.0153 0.0013930359 0.018048577 0.012551423
BXD77 m 0.01784 0.0013930359 0.020588577 0.015091423
BXD79 m 0.01356 0.0013930359 0.016308577 0.010811423
BXD8 m 0.01768 0.0013930359 0.020428577 0.014931423
BXD81 m 0.0187333333 0.0017984016 0.022281731 0.0151849357
BXD83 m 0.01535 0.0015574615 0.0184230025 0.0122769975
BXD84 m 0.0187666667 0.0017984016 0.0223150643 0.015218269
BXD85 m 0.01935 0.0015574615 0.0224230025 0.0162769975
BXD87 m 0.01636 0.0013930359 0.019108577 0.013611423
BXD89 m 0.01735 0.0015574615 0.0204230025 0.0142769975
BXD90 m 0.01405 0.0015574615 0.0171230025 0.0109769975
BXD95 m 0.02668 0.0013930359 0.029428577 0.023931423
BXD98 m 0.0248 0.0013930359 0.027548577 0.022051423
BXD99 m 0.02334 0.0013930359 0.026088577 0.020591423
C57BL/6J m 0.0232 0.0013930359 0.025948577 0.020451423
DBA/2J m 0.01848 0.0013930359 0.021228577 0.015731423




  GWAS USING LINEAR MIXED MODELS